Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq320 87.8 6e-12 >seq320 Length=265502 Score = 87.8 bits (96), Expect = 6e-12 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| ||| ||||| |||| || || | ||||| ||| | || || || || ||| Sbjct 15335 TTCGCCGAAAGACTAATCGCCTTCGCCGCTGTCGAGGGAATTTTCTTCTCTGGTAG-TTT 15393 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || |||||||||||||||||||||||||||| |||| ||||| || || ||||| || Sbjct 15394 CGCTGCCATCTTCTGGTTGAAAAAGCGTGGACTCATGCCTGGTCTCACTTTCAGTAATGA 15453 Query 443820 ACTGATCAGTCGGGACGA 443837 || ||| ||||||| Sbjct 15454 GCTTATCTCCAGGGACGA 15471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588255248997760