Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027981.1 Length=42612 Score E Sequences producing significant alignments: (Bits) Value seq3702 82.4 2e-11 >seq3702 Length=11964 Score = 82.4 bits (90), Expect = 2e-11 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 39816 TTAAAACATTGCCAGATAATTCTGTTGACCTTATTGCCACTGACCCACCTTACTTTCGAG 39875 |||| || ||||| ||||| | ||||||| || || || |||||||| || | || | Sbjct 10727 TTAAGACCTTGCCTGATAACTGCATTGACCTGATAGCAACGGACCCACCGTATTACCGGG 10786 Query 39876 T-AAAGCAAGATGCCTGGGATAACCAGTGG-GATGATGAGGCAGAGTTCCTGGCGTGGCT 39933 | ||| | | | ||||||||||| |||||| || || | ||||| ||| || ||||| Sbjct 10787 TTAAATCCA-ACGCCTGGGATAATCAGTGGAAATCAT-CGCAAGAGTACCTTGCCTGGCT 10844 Query 39934 TGACGATATTCTCTTTGACTTATGGCGAGTATTGAAGCCATCGGGCAGTTTGTATCTATT 39993 ||||| || | | || || ||||| ||| | || || |||| ||| ||||| | || Sbjct 10845 TGACGCAATGTTTGTGGAGTTCTGGCGTGTACTAAAACCTGCGGGGAGTCTGTATGTGTT 10904 Query 39994 TTG 39996 || Sbjct 10905 CTG 10907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136230380521984