Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq3282 136 1e-27 >seq3282 Length=7904 Score = 136 bits (150), Expect = 1e-27 Identities = 188/259 (73%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 ||||| || || ||| ||||||| |||| | ||| || || |||||||| || | | Sbjct 7301 GGCAA-GACCCGGAAGTCCGTTATCTGCCGAACGGTGGTGCCGTTGCTAACCTGACTCTG 7359 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 ||||| | || | |||| || || ||||| ||| ||||||| | || |||||| Sbjct 7360 GCCACGTCAGATACCTGGCGCGACAAGCAGACCGGTGAGCAGAAAGAGCGCACAGAATGG 7419 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 |||||||| | | ||| |||||||| ||| | ||| | ||||||||||||||||| Sbjct 7420 CACCGCGTCACGCTGTACGGAAAGCTGGCTGAAGTGGCTGGAGAATACCTGCGCAAAGGC 7479 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAG-GCTGGCGT 41437 |||||| ||||||| ||||| ||||||||||||||||| ||| || ||| Sbjct 7480 TCACAGGTGTATGTTGAAGGTCAACTGCGCACGCGTAAATGGCAGGATCAGAGCGGGC-A 7538 Query 41438 TGATCGCTACACCACTGAA 41456 ||||| || ||||| ||| Sbjct 7539 GGATCGTTATACCACGGAA 7557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133203323163648