Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq88 122 7e-23 >seq88 Length=1565181 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29953 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCC 30012 ||| |||| ||| ||||| | || |||||| ||||||||| ||||| |||||||| || Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678 Query 30013 CATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG 30072 |||||| | | ||||| || ||||| |||||||||||||| ||| | ||||| Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738 Query 30073 ACACATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 30131 || ||| |||||| || ||||||||||| | | |||| ||||||||||||| Sbjct 328739 -GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCGC 328797 Query 30132 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCT 30165 | | ||||| | | ||| || || |||| ||| Sbjct 328798 AGATTATGATCCTTCGGTCGTCCGGATTGTGCCT 328831 Score = 118 bits (130), Expect = 9e-22 Identities = 177/250 (71%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 30211 GTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACAC 30270 ||||||||| ||||| ||||||| || || | || |||||||| ||||| || | Sbjct 328971 GTAGTCTGCATGCATGTTAGTGTACTTGGCACCAGAGTGTCTCCACTGAAACCCATAGAT 329030 Query 30271 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGA 30330 || || || || ||||| || | || || |||||| ||||| | || | || Sbjct 329031 TGGCCCTAGATCACCCTCCTCACGGTCCTTGAAGCCGTAAGCATCCAAGTATTCACGTGA 329090 Query 30331 ACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 | ||||||||||||||| || || || || || | || | || ||||||||| || Sbjct 329091 GCTGTTGGCGTCCCAGATTTTCACTCCTCGCTTTGATAATTCGTGGGCGTTTGTGGATCC 329150 Query 30391 TCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30450 |||| |||||| || || || ||||| || ||||||| |||||| || || ||||| Sbjct 329151 ACTGATGAACCAGAGGAGTTCTTCCACTACTCCCTTCCAGAAGACCGATTTCGTGGTGAG 329210 Query 30451 GAG-GGGAAA 30459 || |||||| Sbjct 329211 AAGTGGGAAA 329220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406290750829056