Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq2955 297 2e-75 >seq2955 Length=1537 Score = 297 bits (328), Expect = 2e-75 Identities = 442/627 (70%), Gaps = 0/627 (0%) Strand=Plus/Minus Query 81472 GGTCTGACTGGTTGTGAACGTGCAACTGTTCCGGCGGGTTATGTGGGCGTTAAGGTTGAC 81531 || ||||||||||| ||||| || || || || ||||| ||||| || || || || || Sbjct 1236 GGGCTGACTGGTTGCGAACGCGCCACCGTGCCCGCGGGGTATGTTGGTGTAAAAGTAGAT 1177 Query 81532 CTGTATGGTGATGAGAAAGGCGTTCAGCAGCAAGAAGTTGGCGTTGGTAAGTATTGGTTA 81591 || || ||||| || |||||||| |||||||| ||||| ||||| ||||| || |||||| Sbjct 1176 CTCTACGGTGACGAAAAAGGCGTCCAGCAGCAGGAAGTGGGCGTGGGTAAATACTGGTTA 1117 Query 81592 ACCTGGAACGAAGAGATCTATCAGTTCCCGACGTTCAACCAGTTGAACAACTACGAACAA 81651 |||||||||||||| || || ||||| || |||||||||||| | |||||||||| | Sbjct 1116 ACCTGGAACGAAGACATTTACCAGTTTCCAACGTTCAACCAGCTACACAACTACGACAAG 1057 Query 81652 CCGTTTAACTTCCAGACCAAAGATTCTATGACGGTTACTGCGAAGATCGGTGTTGAGTAT 81711 || || | |||||||| || || ||| || | || |||||| || || ||| Sbjct 1056 CCATTCACTTTCCAGACTGCTGACTCAATGGATGTGAAAGCCCGGATCGGCGTCGAATAT 997 Query 81712 TACGTTGACCGCTCTAAGGTTACCAAGATCTTCCAGACCTACCGTAAAGGCGTCCAGGAG 81771 ||||| || | ||||| ||||| || || ||||||||||| || || || | || Sbjct 996 TACGTCGATCCGGAGAAGGTGACCAAAATATTTCAGACCTACCGCAAGGGGGTGGACGAA 937 Query 81772 ATTACCGATGTCAACATTCGTCAGAATATCTCTGATGCGTTGATCAAGGAAGCGGGTACA 81831 || ||||| |||||| | || ||||| ||| || ||| ||||||| | | || | Sbjct 936 ATCACCGAGGTCAACTTGCGCCAGAACATCAGCGACGCGCTGATCAACCACTCTGGAAAG 877 Query 81832 ATGGACATTGGTACACTGGCTGGTGATGGTAAATCTCAGCTTCTGGACCGAGTGACCAAG 81891 ||||| || | || || | | |||||| | ||| | ||||| | || || || Sbjct 876 ATGGATATCAACTCGCTCGCCGCAGGCGGTAAAACGCAGTTACTGGAGCTGGTCACACAG 817 Query 81892 ACCCTGAAGCAGAAACTTGACCCGGTAGGTATCGTTATTGTGAAACTGTCTTACACTGAT 81951 | |||| || || ||||| | || ||| ||||| || ||||| | Sbjct 816 GACTTGAAATCCAAGCTCGACCCTATCGGCATCAGGATTGTAAAGCTGTCATGGGTCAGC 757 Query 81952 GACCTTGGTTATCCTCCTCAGGTAACTGCGTCCATCAACGCTAAGATCGAAGCGACTCAG 82011 ||||| | || || | |||||| | |||||||||||| || |||||||| || ||| Sbjct 756 GACCTGGACTACCCGCAAAAGGTAAAAGAGTCCATCAACGCGAAAATCGAAGCCACCCAG 697 Query 82012 AAAGCGCTGCTGCGTGAAAACGAAATCCAGCAGACTAAAGCTGAAGCTCAGAAACAAATT 82071 || | |||||||||| |||||| ||| | ||||||||||| || ||| || Sbjct 696 CGCGCCTTATTGCGTGAAAATGAAATCGCGCAATCCAAAGCTGAAGCACAAAAAGCCATC 637 Query 82072 GAAGCAGCTCGCGGTGAAGCAGAATCC 82098 ||| ||||| || ||||| || ||| Sbjct 636 GAACAGGCTCGTGGAGAAGCGGAGTCC 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457407711452160