Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028743.1 Length=48594 Score E Sequences producing significant alignments: (Bits) Value seq2992 86.0 2e-12 >seq2992 Length=1942 Score = 86.0 bits (94), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 44134 GAGGTTGGAATGGCTAATCTACGCAAAGAGGCAAAAGGCAGAGAGTGCCAAGTCCGTTTA 44193 ||||| |||||| ||| | | |||||||| | |||| | |||||||| || | | Sbjct 1714 GAGGTGAAAATGGCGAATATCAGGAAAGAGGCTAGAGGCCGTGAGTGCCAGGTTAGGCTT 1773 Query 44194 CCGGGTATCTGTAATCATAATCCGGAAACGGTGGTATTGGCTCACTATCGAATGGCAGGA 44253 |||||||||||||| || | ||||| || || |||| || || |||||| | || Sbjct 1774 CCGGGTATCTGTAACGGCAACGCTGAAACCGTAGTGCTGGCCCATTACCGAATGTCCGGC 1833 Query 44254 TTAAACGGTGTGGGAATGAAACCCGATGATATTTTCGGGGCGTGGGCTTG--CAGTAGCT 44311 | ||| |||||||| || || || ||||||| || |||||||| ||| | | Sbjct 1834 ATTTGCGGCACAGGAATGAAGCCTGACGACCTTTTCGGCGCATGGGCTTGTTCAG--GGT 1891 Query 44312 GCCACGATGAGTGCGACCGTAGAACTCG 44339 | || || || ||||||| |||| || Sbjct 1892 GTCATGACGAAATCGACCGTCGAACCCG 1919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155371878532096