Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq2351 156 5e-33 >seq2351 Length=10305 Score = 156 bits (172), Expect = 5e-33 Identities = 286/419 (68%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 142849 CATAAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCC 142908 ||| || | ||||||||| | ||||| || | ||||| | ||||| | || ||||| Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 142909 TTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 142968 |||||| ||||| || ||||| |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 142969 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATG 143028 || || || ||||| || | || || ||||| || ||||| ||||| ||||||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 143029 CTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTC 143088 || |||| |||||| || ||||| ||||||| | ||| | ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAG 2757 Query 143089 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTAT 143148 |||||||| ||| |||| || || ||||| ||||| | |||| || | | || Sbjct 2756 CGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGAT 2697 Query 143149 TGAGTTAGCAGTTTTATTAATTGATTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGA 143208 | | | || ||||| || | ||| ||| || ||||| | ||||| || Sbjct 2696 AGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGA 2637 Query 143209 ACTAAACTGACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAATCT 143267 || ||||||||||| |||||||| | || | ||| || || || ||||||||||||| Sbjct 2636 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545358548874240