Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq3623 105 2e-18 >seq3623 Length=36615 Score = 105 bits (116), Expect = 2e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 |||||||| ||| | ||| ||||| || ||||| || ||||| ||||| || ||||| | Sbjct 11689 GAAGTCGACGTCGAAGTCAGGCATCGACACACGTTCCGGGTTGAGGAAACGTTCGAACAG 11748 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 || | | || || || |||||||| || | ||| || |||||||||| Sbjct 11749 CAGGTCAAATTCAAGCGGATCGAGATCGGTGATTTTCAGTGAGTAGGCCACCAGCGAGCC 11808 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260 || | ||||||||||| ||||| ||| || |||| || || | ||| ||| || Sbjct 11809 TGCACCCGAGCCGCGCCCCGGGCCTACCGGGACATCGTTGTCTTTTGACCACTGGATAAA 11868 Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGA 39313 || |||| |||||||| |||||||||||||||||||| | || || Sbjct 11869 CTCCATCACGATCAGGAAGTAGCCAGGGAACCCCATCTGGTTGATAACGTTGA 11921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159707674219776