Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq2351 143 3e-29 >seq2351 Length=10305 Score = 143 bits (158), Expect = 3e-29 Identities = 318/471 (68%), Gaps = 12/471 (3%) Strand=Plus/Minus Query 140759 CATCAGGTTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCC 140818 |||||| || |||||||| || || || || | || | | ||||| |||| ||||| Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 140819 TTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 140878 |||||||||||| || || | |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 140879 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATG 140938 || || || ||||| || | || || ||||| || ||||| || || || |||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 140939 TTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACC 140995 ||| |||| |||||| |||||||| ||||||| |||| ||| ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACC---ACCGCGAATCGGGCTACC 2760 Query 140996 TTCAGCACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATA--TATTCG 141053 |||||||| || |||| || |||||||| ||||||| ||| | |||| Sbjct 2759 CAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATTTC 2702 Query 141054 ATGATTGAATTAGCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGC-TTCGATAACCAC 141112 | ||| | | | | || || || || | |||| ||| ||||| || || | ||| Sbjct 2701 ACGATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTC-GCCGCACTCAATCAACAC 2643 Query 141113 GCAGGAACTGAACTGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGA 141172 |||||| |||||||| | || || || | |||| | |||||| || || ||||| || Sbjct 2642 GCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGA 2583 Query 141173 AACCTGTCGTGTAGATACTGCATCATAAAAACGGCAAACGTGCTTCAGACG 141223 || || ||||| | || ||||| || || |||| | |||||| Sbjct 2582 AATCTTGAAGGTAGAAATCGCGTCATAGAAGCGTTTGACGTAATCCAGACG 2532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544920170618880