Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028901.1 Length=43900 Score E Sequences producing significant alignments: (Bits) Value seq2728 98.7 3e-16 >seq2728 Length=1005 Score = 98.7 bits (108), Expect = 3e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193 GCAGGGGAGCAAGCGCGCCCGCGCACTGGCAGCGATTGCACATAAACACGTCAAGCGCTG 252 ||| || |||| ||||| |||||||| | || ||||| ||||| | ||||| Sbjct 26 GCAAGGCGGCAAACGCGCAGCGGCACTGGCGAAAGTCGCGCATAAGCACGTACACCGCTG 85 Query 253 GATTAACCTGACCGGCACACCAGCGCCAAACGGGCTAAAAGACCTGTGGGGGCAGACGTG 312 ||| || || ||||| || || ||||| ||||| || | ||||||||||| ||| | || Sbjct 86 GATGAATCTCACCGGTACGCCTGCGCCGAACGGCCTGATCGACCTGTGGGGCCAGTCATG 145 Query 313 GTTTGTCGACGGTGGCGAACGACTCGGCAGTAGTTATAAGGCATTCACCGATCGCTGGTT 372 ||||||||| |||| | || ||||| ||| | | |||||||| |||||||| Sbjct 146 GTTTGTCGATCATGGCCAGCGTCTCGGGCGTACCTTTGGCGCATTCACTTCCCGCTGGTT 205 Query 373 CA 374 || Sbjct 206 CA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140351786312192