Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028952.1 Length=60934 Score E Sequences producing significant alignments: (Bits) Value seq3480 89.7 2e-13 >seq3480 Length=19940 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 58923 GCGCGGTAGGTCTTGTAGAACCGGTCCCGCAGCGCCCACCAGGCCTGCGCCTTGATGTTG 58982 || |||||||| ||||| ||||| || ||||| | |||||| ||||||||||| | ||| Sbjct 17041 GCACGGTAGGTTTTGTAAAACCGTTCACGCAGTGACCACCACGCCTGCGCCTTCACGTTA 17100 Query 58983 TGGAACATATCACCATTTGTCTTGCCGTCCATGTAGTTGTGCTCGGGGTGCACAACTCCT 59042 ||||||||| | ||| || ||||||| || || | | | ||| | ||||| | Sbjct 17101 GCGAACATATCTCGATTGGTTTTGCCGTTGATATACTCGGCATTGGGATAAACAACCGCA 17160 Query 59043 CCGCCCGCGTTAAAGCC 59059 || || |||||||| || Sbjct 17161 CCCCCGGCGTTAAAACC 17177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194858017857536