Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq2351 176 5e-39 >seq2351 Length=10305 Score = 176 bits (194), Expect = 5e-39 Identities = 300/427 (70%), Gaps = 16/427 (4%) Strand=Plus/Minus Query 142832 CATCAAGTTATTCAACTGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 142891 ||||| || |||||||| ||||| || || | || | | |||||| |||| ||||| Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 142892 CTTGTTGTTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGC 142951 |||||||||||| || |||| |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 142952 AGTAGCAGCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATG 143011 || || || ||||| || | || || ||||| |||||||| || || || |||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 143012 TTTCCAGAACGGAATAACACCAGTATGACGAA--CTTCACCCATACCGATTTTCG---AA 143066 ||| |||| |||||| |||||||| ||| ||||||| |||| ||| | Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATG--GAATGCTTCACC---ACCGCGAATCGGGCTA 2762 Query 143067 CCTTCAGCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATT 143124 || |||||||| ||| |||| ||||||||||| ||||||| ||| | |||| Sbjct 2761 CCCAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATT 2704 Query 143125 CGATGATTGAATTGGCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGC-TTCGATAACC 143183 | ||| | | ||| || || || || | |||| ||| || || || || | | Sbjct 2703 TCACGATAGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTC-GCCGCACTCAATCAAC 2645 Query 143184 ACGCAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAAC 143243 |||||||| |||||||| ||||| || || | |||| | |||||| || || ||||| Sbjct 2644 ACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAAT 2585 Query 143244 GAAACCT 143250 |||| || Sbjct 2584 GAAATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548775979361280