Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq2351 279 6e-70 seq2333 188 8e-43 seq3532 143 3e-29 >seq2351 Length=10305 Score = 279 bits (308), Expect = 6e-70 Identities = 558/814 (69%), Gaps = 31/814 (4%) Strand=Plus/Minus Query 76977 GCGCGTTCCTGAACAAGCAACTGGAACAAATCTGCTGCTTTAATGCGTTTCTTGCGTACC 77036 |||||||| || | | || | ||||| ||| | ||||| ||| ||||||||| | Sbjct 3187 GCGCGTTCTTGCATCATCAGCGAGAACAGATCGACCGCTTTCATGGATTTCTTGCGGATG 3128 Query 77037 GTTGGGTCTTTTTCCAAACTGGT-ATAGAGTTCTTCGAACTCAGTCTGATCAGCTTGATA 77095 | ||||||||| | |||| | ||| | |||||||||| |||||| || || | Sbjct 3127 CTGTCGTCTTTTTC-ATACTGCTGATATAAGCGTTCGAACTCATCCTGATCGGC--GAAA 3071 Query 77096 GAAAGCATCATACAGGCGATCATTTGCAACGTCAG---GGCTGAACAGTGTGATGTAATC 77152 || || |||||||||| | ||||||| |||||||||| ||||| | | Sbjct 3070 -AATGCGTCATACAGGCCG------GGTACGTCAGAGGGGCTGAACAGGGTGATTTCTTG 3018 Query 77153 GTTATTGATTAAACGCTTATACATCAAATCGTTAAGCTGAACGCCATAATCCAGGTGACG 77212 |||| | |||| |||||||| | ||| | ||| ||||| ||||| |||||||| Sbjct 3017 TCCTTTGACCAGGCGCTGATACATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACG 2958 Query 77213 AATACGGTTATTCTCAACACCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACTTCCAA 77272 | ||||| || || || |||||| ||||| ||||||||| |||| ||||||| Sbjct 2957 CACGCGGTTGCCTTCCACGCCACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAG 2898 Query 77273 ATGCCAGATCGGATAATACAACGTTGCAGCACCACCACGAACGCCACCTTGTGAACAGGA 77332 |||||| | ||| ||| |||||||||| || || || || || || || ||||| ||||| Sbjct 2897 ATGCCACAGCGGGTAAAACAACGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGA 2838 Query 77333 TTTAACCGCTGTCTGAATATGTTTCCAGAACGGGATCACGCCTGTATGTACTGCTTCACC 77392 ||| || || ||||| | |||||| |||| || || ||| ||||| | ||||||||| Sbjct 2837 TTTCACTGCGGTCTGGAAATGTTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACC 2778 Query 77393 ACCACGGATTTTAGAACCCATTGCGCGAATGTGTCCAGCATTAACACCGATACCCGCGCG 77452 ||| || || ||||| || ||||| | || || |||| |||||||| || || Sbjct 2777 ACCGCGAATCGGGCTACCCAGCGCACGAATACGACCGGCGTTAATGCCGATACCGGCACG 2718 Query 77453 TTGTGAAATATACTTCACGATCGCA---GAGGTTACAGCATTCAGAGAACCCAGTGAATC 77509 ||||||| || |||||||| ||| ||||| || || | ||| |||| || Sbjct 2717 CTGTGAAACGTATTTCACGATAGCACTGGAGGT---GGCGTTAATGGAATCCAGGCTGTC 2661 Query 77510 ACCTGATTCAATCACTACGCAACTGGAAAACTGACGCGTAGGAGTACGCACACCCGCCAT 77569 || | ||||||| ||||| | |||||||| || || |||||||| || | ||| Sbjct 2660 GCCGCACTCAATCAACACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACAT 2601 Query 77570 AATAGGCGTAGGTAACGACAGCTT-ACGATCCGAAATTGCGTTGTAGAAATCAACTACAT 77628 || ||||| || || || | ||| | | | ||||| |||| ||| || | Sbjct 2600 GATCGGCGTTGGCAATGAAATCTTGAAGGT-AGAAATCGCGTCATAG-----AAGCGTTT 2547 Query 77629 GATTAAATGTATACGGGGTTCTCAGTTCGT--CCTGA-TGCAGACACATAGCAATCAGCA 77685 || ||| | ||| | ||| | | || || || ||| || ||| | ||| | Sbjct 2546 GACGTAATCCAGACGCGTTTCGC-GCGGGTAACCGGAGAACAGGCAGGCAGCCACCAGTA 2488 Query 77686 TAAACGCATATTGCGGTGTTTCGAAGATGTCACCGTTGGTGCGATCCTGTACCAAATATT 77745 | || | | || | ||||| ||||||||||| || ||| | || |||| ||||| Sbjct 2487 CATACAGAAACTGGGCGCTTTCGTAGATGTCACCGGTGACGCGGTTTTGCACCAGATATT 2428 Query 77746 TCCCGATCAACTGCTGTACGCCAGCGTAAGAGAA 77779 |||| |||||||| || ||||||||||||| Sbjct 2427 TCCCTTCCAACTGCTTGACCGCAGCGTAAGAGAA 2394 Score = 150 bits (166), Expect = 2e-31 Identities = 365/539 (68%), Gaps = 24/539 (4%) Strand=Plus/Minus Query 74769 TCGTCGCTGATCTCGGTGTTGAGGTTGCCAACTAGGTAAGAACTCACTTCAACCTCTTGC 74828 ||| || ||||||| | | | | ||| || || |||||||||||||| || |||||| Sbjct 5445 TCGGCGTTGATCTCAGAATCAATTTGGCCGACCAGATAAGAACTCACTTCCACTTCTTGC 5386 Query 74829 GGGGCTACCTGAACGTTGTCAGACTTCAACCATTTGTTCATCCACGGGTACGGGTTAGGA 74888 || || ||||| ||||||||||| || ||| || ||||||||| |||||||| Sbjct 5385 GGAGCAACCTGCACGTTGTCAGAGACCAGCCAGGCATTAATCCACGGGATCGGGTTAGTG 5326 Query 74889 CTCGGTTTAAACGGAGACTGTAACCCAACCGCTCGCATACGTTGGTCGGTTAAGTGTTCG 74948 | || || ||||| | | | ||| |||||| |||| || | ||| | || ||| Sbjct 5325 CGCGTTTGGAACGGCAAGGGCAGCCCTACCGCTTGCATGCGGATATTGGTGATGTATTCA 5266 Query 74949 ATGTA--GGC---GATTGTACTTTTCAGTGTCACGCCGTCAACATC--ACCGATGCTGAA 75001 | ||| ||| || ||| |||| || ||| ||| | |||| |||| || ||| Sbjct 5265 ACGTACTGGCAGAGAATGT-CTTT---GT-TCAGGCC--AATCATCGAACCGTCGCGGAA 5213 Query 75002 TAAGTGTTCAGCCCATTCTTTTTCCTGCTCGTAAACTTCGAGGAAAATC--TTTGTTGC- 75058 | || ||| ||||| ||||| ||||||| || | | || | || | | || || Sbjct 5212 CAGGTATTCCGCCCACTCTTTCTCCTGCT-GT--GCAGCCAGCACAAACAGGTCGTAGCA 5156 Query 75059 TTCTTCTTCGTACTGATACGCGATTTCTGCCATTTCTGGGTCATCTTTACCCATCTGC-- 75116 ||| | || | || | ||||||| ||||||||| || || || | || || Sbjct 5155 TTCCTGTTGGCACGCTTCGGCGATTTGTGCCATTTCCGGATCGTCCTGGCCGGAACGCAT 5096 Query 75117 CAGAGTCGGATCTTGCTTTGAGTACCTTTCTGATGAAGTGCTTCATCACGGGCAATCAGA 75176 |||| || | ||| || ||||| || | || || |||||||| ||||| ||||| Sbjct 5095 CAGATTCAGCATATGC--TGGGTACCGGTCAGGTGCAGCGCTTCATCGCGGGCGATCAGT 5038 Query 75177 CGCATGATCTTCGCGTTACCTTCCATCTTGCCCTGTTCGGCAAAGTTGAAAGTAAAGGTA 75236 || || || ||||| || |||||| | ||||||||||| ||| | ||| Sbjct 5037 TTGATAATTTTGGCGTTGCCCTCCATCAGTTCGCGTTCGGCAAAGGCGAATGAGCAGGCG 4978 Query 75237 AACGAGACATAGAAACGGATCGCTTCCAGAGCGTTGACAGCGTGCATACACAGATAAAG 75295 || |||||| |||||||| |||||||| |||||||| || ||||||||||| Sbjct 4977 AAACTGACATAAAAACGGATGGCTTCCAGCGCGTTGACGCTCATCAGGCACAGATAAAG 4919 Score = 127 bits (140), Expect = 2e-24 Identities = 290/434 (67%), Gaps = 8/434 (2%) Strand=Plus/Minus Query 75996 GCACCGTCGCGGGTGTTGTGATAATACAGAGTTTTCACGCCGTAGTAGTTCGCATAAAGC 76055 |||||||| |||||||| ||||||||||| ||||||| ||| | | | || |||| Sbjct 4180 GCACCGTCACGGGTGTTTTGATAATACAGCGTTTTCAACCCGAACTTATAGGCGGTAAGC 4121 Query 76056 AGGTCA-TCAATGATGGTTTCAGATTTCACTTTACCATCTGGGAAGTTAGCCGGATCATA 76114 | |||| ||| | |||||| |||||| || |||||| |||||||| || Sbjct 4120 AAGTCAGTCAGCAACTGTTTCATCGG-CACTTTTCCTGACGGGAAGCGCGCCGGATCGTA 4062 Query 76115 GTTGGTGTTTGCAGAGATCGCTTGATCAACAAACTTCTGCATAACAGCAACATGAGACAG 76174 ||||||||| ||||| || || ||||| |||||||||||||| | |||| | ||| Sbjct 4061 GTTGGTGTTGGCAGAAATAGCCTGATCGACAAACTTCTGCATCAGCCCAACCAGTTGCAG 4002 Query 76175 ATAACCTTTATTACCGCGTTTTGCCATTGTCCAGAGATAATCATAGAAATCAATCTGGTC 76234 || || | ||| || | |||| ||| || | || ||| ||| || || Sbjct 4001 GTAGCCGTCATT------GTTCGGCATTTCCCACAGTAATTCGTAGGCATCCTTCAGGGT 3948 Query 76235 GTTCTGGTTCGGTACTACCTGGTTGAATGAACCTTCTTTCGAAGATTTCACACTCACAGG 76294 | | | ||| || |||||| || || ||||| || | || | ||| | | Sbjct 3947 TTCGTAATCCGGCACCACCTGGCGCAAAATGCCGTCTTTTGACGCCTTGATACTGATGTG 3888 Query 76295 GCCGCGAGGCGGTTCAATCCCGTTTGTTGAGTTGCTTACTTGAGAACTACTCTCACATGG 76354 ||||| || ||||| || ||||| || | |||| | ||| || | || | || Sbjct 3887 ACCGCGTGGTGGTTCGATACCGTTGGTGGCGTTGGAAATTTGTGACGAGGTTTCCGACGG 3828 Query 76355 CATTAAAGCAGAAAGAGTTGAGTTACGCAAGCCATATTTTTTGATTTCGCCGCGCAACCA 76414 ||| || ||||| || || |||||||| | || | | ||||||| | |||||| Sbjct 3827 CATCAACGCAGAGAGCGTGGAGTTACGTAGACCGTGTGTTTTGATACTGTCGCGCAGTGC 3768 Query 76415 TTCCCAATCGCAAT 76428 |||||||||| ||| Sbjct 3767 TTCCCAATCGTAAT 3754 >seq2333 Length=8475 Score = 188 bits (208), Expect = 8e-43 Identities = 579/881 (66%), Gaps = 36/881 (4%) Strand=Plus/Plus Query 141622 ATATCTGGGTACATACGTTTCGAAGCGCATTCCAGAGCCAATTGTTTGATGTCATAGTTA 141681 ||||| |||||||| || || ||||| ||||| |||| ||| |||||||||||||| Sbjct 4875 ATATCCGGGTACATCCGCTTGCTGGCGCAATCCAGTGCCAGTTGCTTGATGTCATAGTTC 4934 Query 141682 CGATCCCCAGGATTCATGTTTACACCTTTTTCCATAAACATGACCAGTTTAGGGAACACA 141741 |||| ||| || || ||||| | ||| | |||||||| |||||||| Sbjct 4935 GGATCGGCAGCCTTGTGATTGACACCGTCGCGGATAGCGAACACCAGTTTGGGGAACACC 4994 Query 141742 GGGGTAATACCTTGTTTACCCAGACCACGAATACGGTTTTTCAGAATCGCTTTCTGGATC 141801 | ||| ||| | ||| |||||||| ||| ||||| ||| || | || ||| ||| Sbjct 4995 GCGGTTTTACGGTTTTTGCCCAGACCGGCAATGCGGTTGCGCAGGATGGATTGCTGAATC 5054 Query 141802 ATTCGTTCAAACATTCCC-----GTACCAGTACCGAAAGTAATAGTAACGAAAGGTGTTT 141856 | || |||||| || || ||||||| || || || || ||||| | Sbjct 5055 AGGCGCG-----ATTCCCAACGGGTGCCGAGACCGAAACCAAAGGTGACAAACGGTGTCT 5109 Query 141857 GTCCGTTGGCAGTATGCAGCGTGTTAACTTCGTATTCATACGATTGGAAAGCATCAAA-C 141915 | || ||||| || |||||||| || ||||| ||||| ||| ||||| || || | | Sbjct 5110 GACCATTGGCGGTGTGCAGCGTATTTACTTCATATTCCAGCGACTGGAAGGCGTCGTAGC 5169 Query 141916 ACATCTTTTTCAGTCTTTTCCATCGCATATGTACGATC-CAACGA-AATTTTATACTTTT 141973 || |||||||| || || ||||| | || | || || ||| | ||| | Sbjct 5170 AC-TCTTTTTCGGTACGAGACAGTGCATAGG--CGTCCGCATCGGGAATGTGCCACTCAT 5226 Query 141974 TAGCATCCTTAACATGCTTTTCATATGTCATTTCTG---CATACGGAGCCAGCACTTTAT 142030 |||| | ||||||| || | | | | | | |||| ||||| | || || Sbjct 5227 CAGCAGTTTCCCGGTGCTTTT--TAAGGC-TGGCGGTGACGAACGGTGCCAGAATTTCAT 5283 Query 142031 CAA--CGTTTGCAAAGGTTGTCCCGCCGTACTGGTGAGAAGCAATCTGTGCGGTGATCTG 142088 | | || || || ||| || |||||||| ||| || | ||| ||| |||| || Sbjct 5284 CGATACGGTT--AATGGTGGTGCCGCCGTAGATGTGGCTTGCCACCTGCGCGATGATTTG 5341 Query 142089 TGCCATAAGAGCAGTCGCAACACCGATTGATTTCGGGGGTTCGATGTCTGCGTTACCCAT 142148 ||| | | || ||||| ||| ||||| || || || || || ||||||||||| Sbjct 5342 GGCCGTCACTGCTGTCGCGGTTGAGATGGATTTTGGTGGCTCAATCTCCGCGTTACCCAT 5401 Query 142149 CTTGAAGCCATTAGCCAGCATACCTTTCAAATCCACCAGACAGCAGTTTGTGTATGGCGT 142208 |||||| || || | || ||| |||| | || | ||| ||||| | || | | Sbjct 5402 CTTGAACCCCTTGGTCAACATGCCTTCAAGGTCGATCAGCATACAGTT-GAACATCGGGA 5460 Query 142209 -GAACGGGCTGTAATCCAGATCATGATAGTGGATGTCGCCGGAGTCATGCGCTTCTACGA 142267 ||||||| ||| |||||||| || ||||| || || ||| ||||| || || | Sbjct 5461 AGAACGGGGAGTAGTCCAGATCGTGGTAGTGAATTTCACCGCGTTCATGAGCAAGCACCA 5520 Query 142268 TATGTTTCGGAAGGATATGATTACGGGCGAAATGCTTCGCTACAATACCCGCCAGCAAAT 142327 | ||| |||||||| | |||| | ||||| || || ||||| ||||||| | Sbjct 5521 CGTCGCGCGGCAGGATATGTTGCTTGGCGTAGTGCTTGGCAACGATACCGGCCAGCAGGT 5580 Query 142328 CGCGCTGTGTCGGGAATACCCTTGCGTCTTTGTTCGCGTTCTCGTTGGTGATCTCTTTGT 142387 ||||||| || |||| ||| | ||||||||| |||||||||||| | | ||| Sbjct 5581 CGCGCTGGGTAGGGATTACTTTACTGTCTTTGTTGGCGTTCTCGTTGAGCAGGGCCATGT 5640 Query 142388 TGGACAGATTCACCATACCGGAGATATC----TTTGAACAGCTTACTTTTCTGTTCACGG 142443 || | | | |||| ||| || || || ||| || | ||||| ||| Sbjct 5641 TGCTCTGTTCAACCAGACCACGAATTTCCTGATTCAAACGGCCGCGT----TGTTCGCGG 5696 Query 142444 GCAATATCGCGATCGTGACGATATTCGATGTATGCACGGGC 142484 || | ||| ||||||||||| || || ||||| | ||| || Sbjct 5697 GCGACATCACGATCGTGACGGTACTCAATGTAGGTACGTGC 5737 >seq3532 Length=11862 Score = 143 bits (158), Expect = 3e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 67742 ATTACATGCTTTCCGTAAAGGTTCTGGCGATAACGTCGCGCTGTTGTTCTGGAGTCAGTG 67801 |||||| |||||| || || || | | || ||||| || || |||||||| |||| || Sbjct 11149 ATTACAGGCTTTCAGTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATG 11208 Query 67802 CATTAAAGCGAACTGCGTAACCTGAAACGCGGATCGTTAACTGTGGGTACTTCTCAGGAT 67861 || || || ||||| ||||| ||||| ||||| || ||||| ||||| || || || | Sbjct 11209 AGTTGAAACGCACTGCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGT 11268 Query 67862 GTTTCACAGCATCTTCCAGGGTTTCGCGACGTAGCACATTCACGTTTAGGTGCTGTCCAC 67921 |||| || ||||||||||| ||||| || || || || |||||||| ||||| || || | Sbjct 11269 GTTTTACCGCATCTTCCAGCGTTTCACGGCGCAGAACGTTCACGTTCAGGTGTTGCCCCC 11328 Query 67922 CTTCAAC 67928 |||| || Sbjct 11329 CTTCCAC 11335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568445403709440