Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq2351 96.9 3e-15 seq3764 87.8 2e-12 >seq2351 Length=10305 Score = 96.9 bits (106), Expect = 3e-15 Identities = 282/429 (66%), Gaps = 9/429 (2%) Strand=Plus/Plus Query 102615 CCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTATTG 102674 ||||| || || ||||||||||| || ||||| ||||| ||||||||||| || || ||| Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 102675 A-TCAAACTGGTGACACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGATTAT 102733 | | | || |||| |||| || ||||| ||||| | | |||||| | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 102734 GTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATTGGTAGCCCT 102793 ||||| | ||||| || ||||| | | | || ||||||| | |||||||| Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 102794 ATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT---GAC 102849 || || || ||| ||||||| || ||| |||| ||| || |||| ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 102850 TGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATGT 102909 || |||| || ||||| || |||||| | || || ||| ||||||| | | | Sbjct 2828 ---CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 102910 TCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGATTGGA 102969 || | |||||| || | || | | || || || ||||||||||| |||| Sbjct 2885 CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGA 2944 Query 102970 AGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTTATGTTCGAGCG 103029 || ||||| | || | |||| || || | ||| | ||| | |||| |||| Sbjct 2945 AGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCG 3004 Query 103030 CCTGGTGAA 103038 |||||| || Sbjct 3005 CCTGGTCAA 3013 >seq3764 Length=2321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 19443 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 19502 ||||| ||| | ||| |||||||| ||||||| ||||||||||||| ||||||||||| Sbjct 2123 TGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTAACC 2182 Query 19503 ACTGAGCTACGGG 19515 ||||||||| ||| Sbjct 2183 ACTGAGCTAAGGG 2195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501712713815040