Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq3413 205 3e-48 >seq3413 Length=1126 Score = 205 bits (226), Expect = 3e-48 Identities = 308/434 (71%), Gaps = 13/434 (3%) Strand=Plus/Plus Query 6115 TCGACGATCCGTTGCGCTTCGTCTTCGTCAAAGATGCCGGTGTAGCCAAAGGCGAGTCGG 6174 |||| |||||| | |||||||| ||| | ||||| | | ||||| || | || Sbjct 628 TCGATGATCCGCTCTGCTTCGTCGCTGTCGTAAATGCCAGCAAACCCAAATGCCATGCGT 687 Query 6175 GCGCACTGGATCATGGCTTTGTGGCGCAGCATCCGCTTCGGATGGCTCTGCCAGGGCTGG 6234 || ||||| |||| | |||||||||||||| || | || || ||||| |||||| Sbjct 688 GCACACTGAATCAGTGACTTGTGGCGCAGCATACGGGTGGGGTGTGATTGCCACGGCTGG 747 Query 6235 GTGTTGCGCTTGCACTCGGCCATCCATTCGGTGACCTTGATTGGGTGATTGCGGTCCTTG 6294 || ||||||| |||||| |||| |||||||||| | ||||| ||||| || || Sbjct 748 GTATTGCGCTCACACTCGCCCATGTATTCGGTGACTACAGTGGGGTGTTTGCGATCTTTA 807 Query 6295 CGATAGATGATGCAGGTGCATGACTCGTCGTCCT-------GCTGGAAGTCCATCCCATC 6347 || || || |||| || ||| | ||||||| |||| || ||||| ||||| Sbjct 808 CGGTAAATCCTGCAAGTCGATGCGCCCTCGTCCTTATCGTAGCTG-AATTCCATGCCATC 866 Query 6348 GAAC-GCGCCATTTTCATTAATGATCCGCGACCATCCGTCCACGCCTACGACCGGCACGA 6406 ||| ||| || ||| ||||||||||||| |||||| || || || || ||||| || | Sbjct 867 GAATTGCGG-ATGTTCGTTAATGATCCGCGCCCATCCATCGACACCGACAACCGGAACAA 925 Query 6407 TGCCTCCCTTATCCGGGAAGGCATAGATCTCCTTCGTCCAGGGGTTCAGGCCGTACTGGT 6466 | || ||||| || || ||||| || || || || ||||| ||||| || |||||||||| Sbjct 926 TCCCGCCCTTGTCAGGAAAGGCGTAAATTTCTTTTGTCCACGGGTTGAGTCCGTACTGGT 985 Query 6467 CAGCGACGATCAGGAGCGCCTGCATCTGCGCGTCGCTGACTT---GGCCCTTGAAGGCTG 6523 || ||||| || || || | ||| |||| |||| | |||||||| || | Sbjct 986 TGGCAACGATAAGTAGGGCGGTAAATTGCTCGTCCGTGACGTTACCCCCCTTGAACGCCG 1045 Query 6524 TGGCCTTCAGCGTG 6537 | |||||||||| Sbjct 1046 TATTCTTCAGCGTG 1059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155602267675648