Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq88 111 1e-19 >seq88 Length=1565181 Score = 111 bits (122), Expect = 1e-19 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 29725 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCC 29784 ||| |||| ||| ||||| | || |||||| ||||||||| |||||||||||||| || Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678 Query 29785 CATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29844 |||||| | | ||||| || || || |||||||||||||| ||| | ||||| Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738 Query 29845 ACACATGGCA-TGGCACGGAGGAAGGGCCA---TGAGACCCAAGTCTTTGGGGTTCCAGG 29900 || |||| ||||| || ||||| |||| || || | |||| |||||||||| Sbjct 328739 -GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGA---ATGTCTGCTGGGTTCCAGG 328794 Query 29901 CACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCT 29937 | || | ||||| | | ||| || || |||| ||| Sbjct 328795 CGCAGATTATGATCCTTCGGTCGTCCGGATTGTGCCT 328831 Score = 102 bits (112), Expect = 7e-17 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 30020 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30079 || |||||||| ||||| || | || || || || ||||| || | || || |||||| Sbjct 329008 TGTCTCCACTGAAACCCATAGATTGGCCCTAGATCACCCTCCTCACGGTCCTTGAAGCCG 329067 Query 30080 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30139 ||||| | || | || | ||||||||||||||| || || || || || Sbjct 329068 TAAGCATCCAAGTATTCACGTGAGCTGTTGGCGTCCCAGATTTTCACTCCTCGCTTTGAT 329127 Query 30140 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30199 | || | || ||||||||| || |||| |||||| || || || ||||| || ||||| Sbjct 329128 AATTCGTGGGCGTTTGTGGATCCACTGATGAACCAGAGGAGTTCTTCCACTACTCCCTTC 329187 Query 30200 CAAAAGACCCTCTTGGTCGTGAGGAG-GGGAAA 30231 || |||||| || || ||||| || |||||| Sbjct 329188 CAGAAGACCGATTTCGTGGTGAGAAGTGGGAAA 329220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406143557947648