Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq88 114 1e-20 >seq88 Length=1565181 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27219 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCC 27278 ||| |||| ||| ||||| | || |||||| ||||||||| ||||| |||||||| || Sbjct 328619 GTGTGCCAGCATATACGTCAACAGTGAGTAGGAGGCGATGTTGAAGGGCACCCCGAGGCC 328678 Query 27279 CATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTG 27338 |||||| | | ||||| || ||||| ||||||||||| || ||| | ||||| Sbjct 328679 CATGTCTGCGCTTCGTTGGTACAGGTGACAGGAGAGCTCTCCGTCAGCAACGAAGAACTG 328738 Query 27339 ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 27398 | | |||||| || ||||||||||| | | |||| |||||||||||||| Sbjct 328739 GACGAGGCAGTGGCAGGGTGGAAGAGCCATTTTGGGAATGTCTGCTGGGTTCCAGGCGCA 328798 Query 27399 CACGATGATGCGCCTGTCTTCTGGGTTGTTCCT 27431 | ||||| | | ||| || || |||| ||| Sbjct 328799 GATTATGATCCTTCGGTCGTCCGGATTGTGCCT 328831 Score = 109 bits (120), Expect = 4e-19 Identities = 175/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 27477 GTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACAC 27536 ||||||| | ||||| ||||||| || || | || ||||| || ||||| || | Sbjct 328971 GTAGTCTGCATGCATGTTAGTGTACTTGGCACCAGAGTGTCTCCACTGAAACCCATAGAT 329030 Query 27537 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGA 27596 || || || || ||||| || | || || |||||| ||||| | || | || Sbjct 329031 TGGCCCTAGATCACCCTCCTCACGGTCCTTGAAGCCGTAAGCATCCAAGTATTCACGTGA 329090 Query 27597 ACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 | ||||||||||||||| || || || || || | || | || ||||||||| || Sbjct 329091 GCTGTTGGCGTCCCAGATTTTCACTCCTCGCTTTGATAATTCGTGGGCGTTTGTGGATCC 329150 Query 27657 TCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 27716 |||| |||||| || || || ||||| || ||||||| |||||| || || ||||| Sbjct 329151 ACTGATGAACCAGAGGAGTTCTTCCACTACTCCCTTCCAGAAGACCGATTTCGTGGTGAG 329210 Query 27717 GAG-GGGAAA 27725 || |||||| Sbjct 329211 AAGTGGGAAA 329220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369489330631808