Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq2631 333 2e-86 >seq2631 Length=39719 Score = 333 bits (368), Expect = 2e-86 Identities = 619/900 (69%), Gaps = 14/900 (2%) Strand=Plus/Plus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||| |||| || ||| | ||||||||| |||| ||||| || ||| |||| |||||| Sbjct 34475 GTGTGGAATCGTCTGACCAGTAACTTCTGGCTGCCGGAGAAAGTGCCGCTGTCGAACGAC 34534 Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382 || || |||||| ||| | || || ||||| | | || || || || || || Sbjct 34535 ATTCCCTCCTGGAGCACGTTAACTCCCCAAGAGCGCCAGTTAACCATCCGCGTTTTTACT 34594 Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442 || || || ||||| |||||| | || ||| || || ||| | | || ||||| Sbjct 34595 GGACTTACGCTGCTGGACACCCTACAAAACACCGTGGGTGCCCCTACCTTGATGCCCGAC 34654 Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502 ||| ||| ||||| ||||| || || || | |||||| || ||||| |||||||| Sbjct 34655 GCCGTCACGCCGCATGAGGAAGCAGTACTGTCAAACATCAGCTTTATGGAAGCGGTACAC 34714 Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCG 78562 ||| || ||||| ||||| || || ||||| || | ||| | | || || || Sbjct 34715 GCCCGTTCATACAGTTCGATTTTTTCGACGCTCTGTCTCACCAGCGAAGTAGATGATGCC 34774 Query 78563 TTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCC---CAGATCGTCCTGGAC 78619 | || ||| || || |||| |||| || ||| | ||| || || || Sbjct 34775 TATCGCTGGAGTGAAGAAAACGCCACGTTGCAAAAAAAAGCCACACTGAT--TCTTGAAC 34832 Query 78620 TACTACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTC 78679 | |||||| ||| ||| ||| ||| | ||| | ||||| | || || || Sbjct 34833 AA-TACCGCAGCGGCGATCCCCTGATGAAAAAGATCGCCAGCGTATTTCTCGAATCTTTT 34891 Query 78680 CTCTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAAC 78739 || ||||| || ||||| || ||||||||||||||||| ||||| ||||||||||| ||| Sbjct 34892 CTATTCTATTCCGGCTTTTATCTGCCGATGTACTGGTCCAGCCGTGCCAAGCTGACCAAC 34951 Query 78740 ACCGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGA 78799 ||||| || |||| || |||||||||| || ||||| || || ||||| || || || Sbjct 34952 ACCGCCGATCTGATTCGCCTGATTATCCGTGATGAAGCCGTGCACGGGTATTATATTGGC 35011 Query 78800 TACAAGTACCAGCGAGGCCTCGAGACCCAGGGGCCG--GCGCGGCAGGCTGAGCTCAAGG 78857 || || | ||||| || |||| | | | | || | |||||| || | || | Sbjct 35012 TATAAATTCCAGCAGGGTCTCGCCATC--GTTGACGTTGTGCGGCAACAGCAGATAAAAG 35069 Query 78858 AGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTGACTACACCGAGCAGC 78917 | ||| | |||||| | | ||| ||||| ||||| || | |||||| || || Sbjct 35070 ACTACGCCTTCGATTTAATGCAGGATCTCTATGACAATGAAATTCTCTACACTGAAGCGC 35129 Query 78918 TCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACA 78977 | || |||| || || || |||||||| || ||||| |||| ||||||| ||| | Sbjct 35130 TGTACGACGGTGTGGGCTGGACGGAGGATGTGAAAAAGTTTCTGCATTACAACGCCAATA 35189 Query 78978 AGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCC--CAAGGAAGAGACCATGGCAGA 79035 | || |||||||||| || || |||||| ||||||| | | | || | ||| || | Sbjct 35190 AAGCATTGATGAACCTTGGTTATGAAGCATTGTTCCCTGCCAACATGACA-GATGTCA-A 35247 Query 79036 CCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGG 79095 ||||| ||| | ||||| | ||||| || ||||| || ||||| ||||||||||| Sbjct 35248 TCCGGCAATCCTTTCCGCATTGTCACCCAACGCGGACGAAAATCACGATTTCTTCTCCGG 35307 Query 79096 GTCGGGCTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTT 79155 || ||||| ||||||||||| || || | || | |||||| |||||||| || Sbjct 35308 TTCAGGCTCTTCATACGTCATCGGTAAGGCGGTTAATACCGAAGATGATGACTGGGATTT 35367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299307124807424