Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq3879 122 2e-23 >seq3879 Length=3069 Score = 122 bits (134), Expect = 2e-23 Identities = 242/356 (68%), Gaps = 12/356 (3%) Strand=Plus/Plus Query 24979 CGTCGAGGAGATGTGTCGTTGGTTCCGCGTCCCGCCGTTCATGGTGGGGCACATGGACAA 25038 |||||| || || || || |||| ||||| |||||||| ||||| || || || || Sbjct 950 CGTCGAAGAAATCTGCCGCTGGTATCGCGTTCCGCCGTTTATGGTCGGTCATATTACGAA 1009 Query 25039 GCAGTCCAGCTGGGCC---AGCTCTGTGGAGGCGCAGAACCTCCACTTCCTGACCAATAG 25095 || ||| ||||| ||| ||||| | | |||||| ||||||||||||| Sbjct 1010 ACAAAGCAGTTGGGCTTCGAGC---GTGGAAGGGATGAACCTGATTTTCCTGACCAATAC 1066 Query 25096 CCTCCGGCCGCTGCTGGTGAACATCGAGCAGGAGATCACGCGCTGTCTGATCGGCGAGGC 25155 | ||||| | ||||| || || || ||||| ||| | ||||||||| | | | | Sbjct 1067 ATTACGGCCCTTACTGGTCAATATTGAACAGGAAATCGCCCGCTGTCTGCTGGATAATGA 1126 Query 25156 CGATGCGGATGAGTTCTTCGCCGAGTTCGCAGTTGAGGGGCTGCTGCGCGCCGACAGCAC 25215 ||| |||| | || || || || | ||||| || ||||| | |||| ||||| Sbjct 1127 CGA---GGATTATTTT---GCGGAATTTTCTGTTGAAGGACTGCTCAGAACCGATAGCAC 1180 Query 25216 CGCCCGTGCGGCTTGGTACAACACTGCACTGCAGAACGGCTGGATGAGCCGTAACGAGGT 25275 | || || || | |||| ||||| | || || ||||||||||| || || || || Sbjct 1181 GGGTCGAGCAGCCTATTACACGACTGCGTTACAAAATGGCTGGATGAGTCGCAATGATGT 1240 Query 25276 CCGTCGCCTGGAAAACCTGCCACCAATCGAAGGCGGGGATGTCTTCACCGTGCAGT 25331 | | |||||||| ||||| || || || ||||| || | | ||||| |||| Sbjct 1241 GAGGAGACTGGAAAATCTGCCGCCGATTGATGGCGGAGACCTGTATACCGTTCAGT 1296 Score = 84.2 bits (92), Expect = 6e-12 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 25821 CCTGGCGGAGATGTCTTCGAGGGGCTGGCGATCTACAACCTGCTGCGCGAGCACAAGGGC 25880 || || || ||| | || |||||| || | |||||||| | ||| || || || ||| Sbjct 1692 CCGGGTGGCGATCTGTTTGAGGGGTTGACTATCTACAATCAGCTACGTGAATACGCTGGC 1751 Query 25881 AAGGTCACCGTACGCGTGCTCGGCCTGGCAGCTTCCGCAGCGTCGTTCATTGCCATGGCG 25940 || || ||||| | | || | || |||||||| || || ||||||||||| | Sbjct 1752 AAAGTGACCGTGAAAATAGTGGGGTTAGCGGCTTCCGCGGCTTCAATCATTGCCATGTCA 1811 Query 25941 GCCGATGAGGTGAAGATCGCCCGCGCCGGCTTCCTGATGATCCACAACGCCTGG 25994 | ||||||| | | |||| ||| | |||||||||||||||||| ||||| Sbjct 1812 GGCGATGAGATACAAATCGGGCGCAGTGCTTTCCTGATGATCCACAACACCTGG 1865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133859292252928