Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031022.1 Length=108050 Score E Sequences producing significant alignments: (Bits) Value seq3176 122 6e-23 >seq3176 Length=18404 Score = 122 bits (134), Expect = 6e-23 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 55488 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTG 55547 ||||||| | |||||| || ||||| |||||||||| | ||| ||||| ||||| | Sbjct 6314 ATTACATTGACTGAGTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCG 6373 Query 55548 CGTTAAAACGTACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGAT 55607 ||| || || || || || || ||||||||||| || || || || |||||||| || | Sbjct 6374 AGTTGAAGCGCACGGCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGT 6433 Query 55608 GTTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTC 55667 ||| | |||||||| ||| ||||| | | ||| || || || ||||| ||||| | Sbjct 6434 GTTCCATGGCATCCAACAGCATTTCACGGTTCATCACGTTCACGTTCAGGTGTTGACCAC 6493 Query 55668 CCTCGAT 55674 | ||||| Sbjct 6494 CTTCGAT 6500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345618485081728