Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq3532 131 2e-25 seq3176 113 5e-20 >seq3532 Length=11862 Score = 131 bits (144), Expect = 2e-25 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 60708 ATTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60767 |||||| || | ||||| ||||| | || ||||| || |||||||| || |||| | Sbjct 11149 ATTACAGGCTTTCAGTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATG 11208 Query 60768 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 60827 |||| || || ||||||||||| || ||||||||||||| |||||| ||||||||||| | Sbjct 11209 AGTTGAAACGCACTGCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGT 11268 Query 60828 GCTTAACTGCATCTTCCAGAGT 60849 | || || ||||||||||| || Sbjct 11269 GTTTTACCGCATCTTCCAGCGT 11290 >seq3176 Length=18404 Score = 113 bits (124), Expect = 5e-20 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 60722 GTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 60781 ||||| ||||| | |||||||| |||||||||| ||||| ||||| ||||| || Sbjct 6328 GTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCGAGTTGAAGCGCACG 6387 Query 60782 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828 |||||||| || ||||||||||||| |||||||||||||||||| || Sbjct 6388 GCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGTG 6434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546366498877440