Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq14 262 5e-65 seq320 96.9 5e-15 >seq14 Length=2234412 Score = 262 bits (290), Expect = 5e-65 Identities = 860/1323 (65%), Gaps = 25/1323 (2%) Strand=Plus/Minus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| || | || |||||||| | | | || ||||| || | ||||||||||| | Sbjct 776548 TCTTGTCGACAGTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACATTC 776489 Query 76831 CAGTTTTTAGACCCAGACTCC-ATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 |||| || | | |||| ||| | ||| ||||||||||| || ||||| | | Sbjct 776488 CAGTCTTCA-ATCCAGCTTCCCAACCGAAGAAATGCATGGACGTGAGTTTCTCAGTGGTT 776430 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 |||| ||| || |||| ||| | ||||| ||||||| ||||| || | |||||| Sbjct 776429 GGATTGGCCATGTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGATCAGCA 776370 Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009 |||||||| | || || | || ||||| ||||| | ||| || | | | |||| Sbjct 776369 GCCATTTTGAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGAGTGCCTTGAGG 776310 Query 77010 TCATCTGGAAGGTTTG-----TATTTTGAATGGAACCACCATCTGATATAATTGTATTCT 77064 || |||| | ||| || | ||||| || ||| || | ||| || ||||| Sbjct 776309 TCTGCTGGTA--TTTCCTCAATACTCTGAATTGACCCATTATTCGCTATTATCAGATTCT 776252 Query 77065 TTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTA 77124 | || | ||| | ||| | || | || || | | || || ||||| ||||| || | Sbjct 776251 TCATGTGATCGTCCCAGAGATTGCGATCAGTGAGGTCCCTCAGCAGATGGGGATTGACGA 776192 Query 77125 TTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 77184 |||||||| ||||||| || | | | ||| || || ||||| || || || | | Sbjct 776191 CCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGG 776132 Query 77185 ATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAAC 77244 || ||||| |||| || || || || || || |||||||| ||||||| | | | Sbjct 776131 CCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGTAGCAGAG 776072 Query 77245 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT--CCAATCCCAAAGATC 77302 || |||| || ||||| ||| || ||| | || || ||| ||||| || | Sbjct 776071 AGTTCCTGACCCC--GTGTTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCCAGAGGTT 776014 Query 77303 TGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATT 77362 || ||| ||| |||| | ||||| || || || || | || | || || || Sbjct 776013 TGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGCGAGCCTTT 775954 Query 77363 ATATGTTTCATAAGGTCC-TTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGT 77421 || || || |||| || |||| || || |||||||| || |||| || || | Sbjct 775953 GTACGTCTCGTAAGTACCCTTCTCTTGG-GCGAGTTCACAGGATGCCTCCAGGGCACCAT 775895 Query 77422 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGAT 77481 | || | || ||||| |||| | ||||| | || || ||| ||| || || |||| Sbjct 775894 AGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCGAATGGAT 775835 Query 77482 AATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTC 77541 || | | || | || |||||||| | |||||||||||||| || || || | |||| Sbjct 775834 AACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTC 775775 Query 77542 TCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGA 77601 || | ||||| | | | || || || ||||| ||||| | ||| || | | | || Sbjct 775774 TCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGATGACCCTGTCGA 775715 Query 77602 GATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA-----TCTTCC 77656 ||||||| || ||||| || || ||| ||||| || ||| | ||||| Sbjct 775714 GATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGGTCTTCTTCA 775655 Query 77657 ATCTAT-AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715 | || ||||||||||| | ||||| ||||| | ||| || || || || |||| | Sbjct 775654 CTGGATCCACAAACATGTTGACTGCTATCGATGCCAAATTGCAGACAGCAACTTCATCGG 775595 Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775 | | | || | | |||||||| || | || || ||||| || || || || || | Sbjct 775594 GGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTGTTCCAAGGTTCT 775535 Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835 || ||| || | ||||| | ||||| || || || | ||||| || || |||| Sbjct 775534 TCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAGTTCCAGTCTCAA 775475 Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC--G 77893 ||||| | ||| | | |||| | | | ||| | | ||||| | | Sbjct 775474 CTTGTGACATTAGAATTGCTGTCCACAGCTCCCGGGCTGGCACTTGACGCTTGTAACGAG 775415 Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953 |||| ||| || || | || || ||| || ||||| || |||||| ||| | Sbjct 775414 CCTC-CTC-CTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCCCAAGTGTCACAGAG 775357 Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013 || || || || | |||||||||| |||| ||| ||| || || |||||||| Sbjct 775356 GCCTGGACACTCGTGGGGGCACATCAGACTCCAGGGACCGTCTGCCAGGACACGTTTCAT 775297 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 || | ||| |||||||| || || ||||| || || | || | ||| || ||||| Sbjct 775296 GAACAAATCGGGTATCCACAGGGCGTAGAATAGCTCACGTGCTCGGTATTCCTCTTTTCC 775237 Query 78074 TGT 78076 ||| Sbjct 775236 TGT 775234 Score = 255 bits (282), Expect = 8e-63 Identities = 828/1273 (65%), Gaps = 21/1273 (2%) Strand=Plus/Minus Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCC-ATCCGTAGAAATGCATGCTTGTCAG 76876 ||||||||||| ||||| || | | |||| ||| | ||| ||||||||||| || || Sbjct 232948 AGATAGTACATCCCAGTCTTCA-ATCCAGCTTCCCAACCGAAGAAATGCATGGACGTGAG 232890 Query 76877 TTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGC 76936 || | | ||| ||| || |||| ||| ||||||| |||||||| ||||| Sbjct 232889 CTTCTCAGGGGTTGGACTGGCCATGTGAACATTGGTCGACTGGGACTGATCGATAAAAGC 232830 Query 76937 TCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAA 76996 |||| |||||| |||||||| | || || | || ||||| ||||| | ||| || | Sbjct 232829 CCCTCGATCAGCAGCCATTTTCAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTA 232770 Query 76997 AACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATAT 77053 | | ||||| || |||| | || || | || || || ||| | | ||| Sbjct 232769 CAGTGCCTTGATGTCTGCTGGTATTTTCTCGATACTCTGGATCGACCCATTGTTCGCTAT 232710 Query 77054 AATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATG 77113 || |||||| || || || | ||| | | | || || | | | |||||||| Sbjct 232709 TATCAGATTCTTCATGTCGTCGTCCCAGAGATCGCGTTCAGTGAGGTCCTTCAGGAGATG 232650 Query 77114 AGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATA 77173 ||||| || | || ||||| ||||||| || | | | ||| || || ||||| || Sbjct 232649 GGGATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTA 232590 Query 77174 TGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGC 77233 || || | | || ||||| |||| || || || || || || |||||||| ||||| Sbjct 232589 GGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGC 232530 Query 77234 CACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT--CCAA 77291 || | | | || |||| || ||||| ||| || ||| | || || ||| Sbjct 232529 CAGTAGCAGAGAGTTCCTGACCCC--GTGTTGAGATATTTTCTCCTTGAGTTTAGCCCAG 232472 Query 77292 TCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCA 77351 ||||| || | || ||| ||| |||| | ||||| || || || || | || | Sbjct 232471 TCCCAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACT 232412 Query 77352 TATGATCCATTATATGTTTCATAAGGTCC-TTCTGTTTCAGCTAGTTCACAACTCGCTTC 77410 || || || || || || |||| || |||| || || |||||||| || || Sbjct 232411 GGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGG-GCGAGTTCACAGGATGCCTC 232353 Query 77411 CAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACT 77470 || || || || || | || ||||| |||| | ||||| | || || ||| ||| Sbjct 232352 CAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACT 232293 Query 77471 ATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAAT 77530 || || |||||| | | || | || |||||||| | |||||||||||||| || || Sbjct 232292 GTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCAT 232233 Query 77531 AGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTAT 77590 || | |||||| | ||||| | | | || || || ||||| ||||| | ||| || Sbjct 232232 GGGACGGTGTCTCATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGAT 232173 Query 77591 AATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA 77650 | | | ||||||||| || ||||| || || ||| ||||| || ||| | Sbjct 232172 GACCCTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATA 232113 Query 77651 -----TCTTCCATCTAT-AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGC 77704 ||||| | || ||||||||||| | ||||| ||||| | ||| || || || Sbjct 232112 GGTCTTCTTCACTGGATCCACAAACATGTTGACTGCTATCGATGCCAAATTGCAGACAGC 232053 Query 77705 TACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGT 77764 || |||| | | | | || | | |||||||| || | || || ||||| || || Sbjct 232052 AACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTGT 231993 Query 77765 GCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGT 77824 || || || | || ||| || | ||||| | ||||| || || || | ||||| Sbjct 231992 TCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAGT 231933 Query 77825 CCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGA 77884 || || |||| ||||| | ||| | | |||| | | | ||| | | Sbjct 231932 TCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACAGCTCACGGGCTGGCACTTGACG 231873 Query 77885 TTTGTATC--GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAA 77942 ||||| | ||||| ||| || || | || || ||| || ||||| || |||||| Sbjct 231872 CTTGTAACGAGCCTC-CTC-CTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCCCAA 231815 Query 77943 ACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTA 78002 ||| | || || || || | ||||||||||| |||| ||| ||| |||| Sbjct 231814 GTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAACTCCAGGGACCGTCTGCCTTG 231755 Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || |||||||| || | ||| |||||||| || || || || || || | || | | Sbjct 231754 ACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTAGAACAGCTCACGTGCTCGGTAT 231695 Query 78063 TCTTCATTTCCTG 78075 || || ||||||| Sbjct 231694 TCCTCTTTTCCTG 231682 Score = 129 bits (142), Expect = 8e-25 Identities = 363/555 (65%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 ||||||||||| || ||||| |||| || | || |||| ||||| || || || || Sbjct 231592 CCTGTATTCTTCTTTAGATCTAGAACATCGAAGATGTCAGCGTGCCAGGGCTCCAGGTAG 231533 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 || || | | ||||| ||||| ||||| |||||||| | ||| | || |||||||| Sbjct 231532 ATGGCAAATGCCCCAGGACGTTTGTTACCACCCTGATCAACATAACGTGCTGTGTTATTG 231473 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251 ||||| | | ||| || | || || || ||| | ||||| || |||| || | Sbjct 231472 TAAACACGAAGCATGGGCACAAGCCCATTGGATATGCCATTGGTGCCAGCTATTCGTGTA 231413 Query 78252 CCACTTGCGCGAATATTACTAATGGATATC-CCTATTCCTCCTGCCATCTTAGATATTAG 78310 || | || | || | | | || | || || || || || || ||| || Sbjct 231412 CCCTTGGCTCTGAT-GCAGTGAACATTAACTCCAATGCCACCAGCTGATTTGCTTATCAG 231354 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 || || | || | || |||||||| ||||| |||||||| || ||| | || || Sbjct 231353 TGCACACCTCTTGAGGGTGTCGTAGATGCCCTCGATACTGTCCTCAGTCAGTGTCAGCAG 231294 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||||||||| ||||| || || | |||| | || || | | || || ||||| Sbjct 231293 AAAACAGCTCGACATCTGTTGTCTACCAGTGCAGGCTGAGAAGAGCGATGGTGAGGCATG 231234 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTG 78490 || || || | || || || |||||| || ||||| || || |||||| | Sbjct 231233 TGTGAAGTATCTCTCGGACAGATAATTGTACGTCTCAATGACTCTGTCGATGTCCTCCTC 231174 Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550 || ||||| || || || | ||||| ||| || ||| || ||||| ||| ||| Sbjct 231173 GTGTATTCCAACTGCCACTCTCATCAGCATGTGGGCAGGCCTCTCAACGACTTTACCATT 231114 Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610 ||||||| || || |||| ||||| || ||||| || ||||| ||||| Sbjct 231113 GATTTTCAGCAGATAACTGCGCTCCAGGGTTTTGAAGCCAAAGTAATTGTAGCTGAAGTC 231054 Query 78611 TCTCTCGTAAATAAT 78625 || | |||||| || Sbjct 231053 TCGGTTGTAAATTAT 231039 >seq320 Length=265502 Score = 96.9 bits (106), Expect = 5e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48411 TAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAAT 48470 ||||| || || ||||| |||||| || || || ||||| || || || | || ||| Sbjct 14926 TAAGTTTCAATCAAAAGGGAATACATCTCAGAATGTATATTCTCCATAGCAACTTGGAAT 14867 Query 48471 CCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTC 48530 || || || |||| || || |||| || |||||| || |||| ||| | | |||| Sbjct 14866 CCATAGAAGCATCGTGCCTCAGTGACTTGCACCTCCTGACTGAATCTTTCCACAAGATTC 14807 Query 48531 TCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTT 48590 ||||| || |||||||| ||||||||||| |||| ||| || ||| |||| | Sbjct 14806 TCATTCACAATTCCATCTGAGGCAGCAAAAAAAGCTAGTACGTGGGAAATGAAATGGCGT 14747 Query 48591 TCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTT 48628 || ||| ||| ||| ||||||| || ||| || Sbjct 14746 TCATTGTCGTTCAATTTCACCCAGTCAAGGAGATCCTT 14709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694634344427520