Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq3282 107 5e-19 >seq3282 Length=7904 Score = 107 bits (118), Expect = 5e-19 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26956 CTGATCAGTCCATTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCG 27015 |||||| ||||||||| || ||||| ||||||| |||||| ||||||||| Sbjct 7530 CTGATCCTGCCATTTACGCGTGCGCAGTTGACCTTCAACATACACCTGTGAGCCTTTGCG 7471 Query 27016 CAGGTATTCACCAGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGT 27075 ||||||||| ||||| | ||| |||||||| ||| | | |||||||||||||| || Sbjct 7470 CAGGTATTCTCCAGCCACTTCAGCCAGCTTTCCGTACAGCGTGACGCGGTGCCATTCTGT 7411 Query 27076 CTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAG 27135 ||||||| | || || || ||| || ||| | || | ||||| | | || Sbjct 7410 GCGCTCTTTCTGCTCACCGGTCTGCTTGTCGCGCCAGGTATCTGACGTGGCCAGAGTCAG 7351 Query 27136 ATTGGCAACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCCTAAATTACC 27195 || ||||| || ||||| ||||| || || ||||| || || | || | ||| || Sbjct 7350 GTTAGCAACGGCACCACCGTTCGGCAGATAACGGACTTCCGGGTCTTGCCCCAGATTCCC 7291 Query 27196 GA 27197 || Sbjct 7290 GA 7289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134009685166080