Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq2351 284 1e-71 seq2333 172 6e-38 seq3532 149 7e-31 >seq2351 Length=10305 Score = 284 bits (314), Expect = 1e-71 Identities = 559/813 (69%), Gaps = 29/813 (4%) Strand=Plus/Plus Query 43201 TTCTCTTACGCTGGCGTACAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCACCAAC 43260 ||||||||||||| || |||||||| |||||||||||| |||| | ||| || | Sbjct 2394 TTCTCTTACGCTGCGGTCAAGCAGTTGGAAGGGAAATATCTGGTGCAAAACCGCGTCACC 2453 Query 43261 GGTGACATCTACGAAACACCGCAATATGCGTTTATGCTGATTGCTATGTGTCTGCA-TCA 43319 |||||||||||||||| | || | | || | | ||| | ||| || ||| || Sbjct 2454 GGTGACATCTACGAAAGCGCCCAGTTTCTGTATGTACTGGTGGCTGCCTGCCTGTTCTCC 2513 Query 43320 GGACGAAC-CGCGAACCCTGAGCGCATTTAATCATGTTGTCGATTTCTACAACGCAATTT 43378 || | |||||| | | | ||| ||| || || ||| |||| |||| Sbjct 2514 GGTTACCCGCGCGAAACGCGTCTGGATTACGTCAAA----CGCTT-CTATGACGCGATTT 2568 Query 43379 CGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGT 43437 | | | | ||| | || || || ||||| || ||| | || |||||||| || || ||| Sbjct 2569 CT-ACCTTCAAGATTTCATTGCCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGT 2627 Query 43438 CAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTA 43497 ||||| | ||||| ||||||| | || || |||| ||| | || || Sbjct 2628 CAGTTCAGCTCCTGCGTGTTGATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCC--- 2684 Query 43498 ACCTC---TGCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGA 43554 ||||| ||| |||||||| || ||||||| || || |||||||| |||| || || Sbjct 2685 ACCTCCAGTGCTATCGTGAAATACGTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGT 2744 Query 43555 CACATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATC 43614 | ||||| || ||||| || || |||||||||||| | ||||| ||| || Sbjct 2745 CGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAGCATTCCATACTGGCTGTATT 2804 Query 43615 CCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGT 43674 || |||| |||||| | ||||| || || |||||||| ||||| || || || || || Sbjct 2805 CCTTTCTATAAACATTTCCAGACCGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGC 2864 Query 43675 GGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTG 43734 || || |||||||||| ||| ||| | |||||| ||||||| |||| ||||||||| ||| Sbjct 2865 GGAGCGGCAACGTTGTTTTACCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTG 2924 Query 43735 AAAAACAACAAAGGTGTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTT 43794 || |||||| || || || ||||| | |||||||| ||||| ||||| ||| | Sbjct 2925 AAGAACAACCGTGGCGTGGAAGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTG 2984 Query 43795 AACGATTTGATGTATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCC---CT 43851 ||| | |||||||| |||| | |||| | | ||||| |||||||||| || Sbjct 2985 AACAAGCTGATGTATCAGCGCCTGGTCAAAGGACAAGAAATCACCCTGTTCAGCCCCTCT 3044 Query 43852 GACGTTGCAAATGATCGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAA 43911 ||||| | |||||||||| || || | || || |||||| |||||||||| Sbjct 3045 GACGTACC------CGGCCTGTATGACGCATT-TTTC--GCCGATCAGGATGAGTTCGAA 3095 Query 43912 GAACTCTAT-ACCAGTTTGGAAAAAGACCCAACGGTACGCAAGAAACGTATTAAAGCAGC 43970 | ||| | |||| | ||||||||| | | ||||||||| || ||||| | Sbjct 3096 CGCTTATATCAGCAGTAT-GAAAAAGACGACAGCATCCGCAAGAAATCCATGAAAGCGGT 3154 Query 43971 AGATTTGTTCCAGTTGCTTGTTCAGGAACGCGC 44003 ||| ||||| | || | | || |||||||| Sbjct 3155 CGATCTGTTCTCGCTGATGATGCAAGAACGCGC 3187 Score = 129 bits (142), Expect = 7e-25 Identities = 360/539 (67%), Gaps = 24/539 (4%) Strand=Plus/Plus Query 45685 CTTTATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATTCGTTTCTATGTCTCGTTT 45744 ||||||||||| || |||||||| |||||||| || ||||| |||||| || Sbjct 4919 CTTTATCTGTGCCTGATGAGCGTCAACGCGCTGGAAGCCATCCGTTTTTATGTCAGTTTC 4978 Query 45745 ACCTTTACGTTCAACTTTGCCGAACAGGGCAAGATGGAAGGTAACGCAAAGATCATGCGT 45804 ||| | ||| ||||||||||| | |||||| || ||||| || || || Sbjct 4979 GCCTGCTCATTCGCCTTTGCCGAACGCGAACTGATGGAGGGCAACGCCAAAATTATCAAA 5038 Query 45805 CTGATTGCCCGTGATGAAGCACTTCATCAGAAAGGTACTCAAAGCAAGATCCGACTCTG- 45863 ||||| ||||| |||||||| || || | || ||||| || ||| | || |||| Sbjct 5039 CTGATCGCCCGCGATGAAGCGCTGCACCTGACCGGTACCCA--GCATATGCTGAATCTGA 5096 Query 45864 -GCAGATGGGTAAAGATGACCCAGAAATGGCAGAAATCGCGTATCAGTACGAAGAAGAA- 45921 || || | || || || ||||||||| ||||||| | || | || | ||| Sbjct 5097 TGCGTTCCGGCCAGGACGATCCGGAAATGGCACAAATCGCCGAAGCGTGCCAACAGGAAT 5156 Query 45922 GCAACA--CAGATTTTCCTCGAAGTTTACGAGCAGGAAAAAGAATGGGCTGAACACTTAT 45979 || || | | || | || | | || ||||||| ||||| ||||| ||| || | | Sbjct 5157 GCTACGACCTGTTTGTGCTGGCTGC--AC-AGCAGGAGAAAGAGTGGGCGGAATACCTGT 5213 Query 45980 TCAGTATTGGT--GATGTTGACGGCGTGACACTGAAAAGTACAATC---GCCTATA--TC 46032 || | ||| |||| | ||| ||| || |||| ||| || ||| || | Sbjct 5214 TCCGCGACGGTTCGATGATT--GGCCTGA-AC---AAAG-ACATTCTCTGCCAGTACGTT 5266 Query 46033 GAACACTTAACCGACCAACGTATGCGAGCGGTTGGGTTACAGTCTCCGTTTAAACCGAGT 46092 ||| || | ||| | || |||| |||||| ||| | | | ||||| || || | Sbjct 5267 GAATACATCACCAATATCCGCATGCAAGCGGTAGGGCTGCCCTTGCCGTTCCAAACGCGC 5326 Query 46093 CCTAACCCGTATCCGTGGATGAACAAATGGTTGAAGTCTGACAACGTTCAGGTAGCCCCG 46152 |||||||| |||||||| || ||| || ||||||||||| ||||| || ||| Sbjct 5327 ACTAACCCGATCCCGTGGATTAATGCCTGGCTGGTCTCTGACAACGTGCAGGTTGCTCCG 5386 Query 46153 CAAGAGGTTGAAGTAAGTTCTTACCTGGTTGGCAACCTCAACACCGAGATCAGCGACGA 46211 ||||| || ||||| |||||||| ||||| ||| | | | | ||||||| || ||| Sbjct 5387 CAAGAAGTGGAAGTGAGTTCTTATCTGGTCGGCCAAATTGATTCTGAGATCAACGCCGA 5445 Score = 123 bits (136), Expect = 3e-23 Identities = 289/434 (67%), Gaps = 8/434 (2%) Strand=Plus/Plus Query 44552 ATTGCGATTGGGAATGGTTGCGCGGCGAAATCAAAAAATATGGCTTGCGTAACTCAACTC 44611 ||| |||||||||| |||||| | ||||||| | | || | |||||||| || | Sbjct 3754 ATTACGATTGGGAAGCACTGCGCGACAGTATCAAAACACACGGTCTACGTAACTCCACGC 3813 Query 44612 TTTCCGCTTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTG 44671 | || || || ||||| | || | || ||| | |||| | || ||||| || | Sbjct 3814 TCTCTGCGTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCG 3873 Query 44672 AACCGCCTCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGTTCATTCAACCAGGTAG 44731 |||| || ||||||| | ||| | || | || ||||| || || |||||| | Sbjct 3874 AACCACCACGCGGTCACATCAGTATCAAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGG 3933 Query 44732 TACCGAACCAGAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCG 44791 | ||| | | | | || ||| ||| || | || ||| |||| | || Sbjct 3934 TGCCGGATTACGAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAAC---- 3989 Query 44792 GTAATAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCT 44851 ||| | || || ||| | |||| | |||||||||||||| ||||| || || | Sbjct 3990 --AATGACGGCTACCTGCAACTGGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTT 4047 Query 44852 CTGCAAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAACCA 44911 |||| ||||||||||| |||||||| |||||| || |||||| |||||| Sbjct 4048 CTGCCAACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTG-CCGATGAAACAG 4106 Query 44912 TCATTGA-TGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCACAAC 44970 | ||| |||| ||||| || | | | ||| ||||||| ||||||||||| ||| Sbjct 4107 TTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAAC 4166 Query 44971 ACCCGCGACGGTGC 44984 ||||| |||||||| Sbjct 4167 ACCCGTGACGGTGC 4180 >seq2333 Length=8475 Score = 172 bits (190), Expect = 6e-38 Identities = 616/943 (65%), Gaps = 45/943 (5%) Strand=Plus/Minus Query 155821 CAACGAGAACGCGAACAAAGACGCAAGGGTTTTCCCGACACAGCGCGATCTGTTGGCGGG 155880 |||||||||||| ||||||||| | || |||| || |||||||| ||| |||| || Sbjct 5627 CAACGAGAACGCCAACAAAGACAGTAAAGTAATCCCTACCCAGCGCGACCTGCTGGCCGG 5568 Query 155881 TATCGTAGCGAAACACTTCGC-ACGTAACCACATTCTACCAAAACACATCGTAGAAGCGC 155939 |||||| || || |||| ||| | | ||| | || || || || | || || | Sbjct 5567 TATCGTTGCCAAGCACTACGCCAAGCAAC-ATATCCTGCCGCGCGACGTGGTGCTTGCTC 5509 Query 155940 ATGATTCTGGTGATATCCATTATCATGATCTGGATTACAGCCCGTTCACGCC-ATACACA 155998 |||| ||||| || || || || |||||||| ||| ||||||| || || || Sbjct 5508 ATGAACGCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCA 5449 Query 155999 AACTGCTGTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCA 156058 | ||| ||| | || | |||| ||| || | || || ||||||||||||||||| Sbjct 5448 A-CTGTATGCTGATCGACCTTGAAGGCATGTTGACCAAGGGGTTCAAGATGGGTAACGCG 5390 Query 156059 GACATCGAACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCA 156118 || || || || || ||||| ||| ||||| || | | ||| || |||| ||| Sbjct 5389 GAGATTGAGCCACCAAAATCCATCTCAACCGCGACAGCAGTGACGGCCCAAATCATCGCG 5330 Query 156119 CAGATTGCTTCTCACCAGTACGGCGGGACAACCTTTGCAAACGTG--GATAAAGTGCTGG 156176 ||| | || ||| |||||||| || ||| || || ||| ||| || | |||| Sbjct 5329 CAGGTGGCAAGCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGG 5272 Query 156177 CTCCGTATG---CAGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAA 156233 | |||| | | | | | | || ||||||| | |||| | ||| | | Sbjct 5271 CACCGTTCGTCACCGCCA-GCCTTA--AAAAGCACCGGGAAACTGCTGATGAGTGGCACA 5215 Query 156234 TTTCGTTAGAT-CGTACA--TATGCGATGGAAAAGACTGAAAAAGATGTGTTT-GATGCT 156289 || | ||| || || ||||| || || |||||||| ||| | || || Sbjct 5214 TTCCC---GATGCGGACGCCTATGCACTGTCTCGTACCGAAAAAGA-GTGCTACGACGCC 5159 Query 156290 TTCCAATCGTATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTC 156349 ||||| ||| ||||| ||||| || |||||||| || ||||| || || ||||| || Sbjct 5158 TTCCAGTCGCTGGAATATGAAGTAAATACGCTGCACACCGCCAATGGTCAGACACCGTTT 5099 Query 156350 GTTACTATTACTTTCGGTACTGGTAC-----GGGAATGTTTGAACGAATGATCCAGAAAG 156404 || || || ||||||| || || |||||| || |||| ||| || Sbjct 5098 GTCACCTTTGGTTTCGGTCTCGGCACCCGTTGGGAATCG-----CGCCTGATTCAGCAAT 5044 Query 156405 CGATTCTGAAAAACCGTATTCGTGGTCTGGGTAAACAAGGTATTACCCCTGTGTTCCCTA 156464 | || ||| ||||| ||| |||||||| ||| | ||| ||| | |||||||| | Sbjct 5043 CCATCCTGCGCAACCGCATTGCCGGTCTGGGCAAAAACCGTAAAACCGCGGTGTTCCCCA 4984 Query 156465 AACTGGTCATGTTTATGGAAAAAGGTGTAAACATGAATCCTGGGGATCGTAACTATGACA 156524 ||||||| | ||| | ||||| || || ||| |||| |||||||||| Sbjct 4983 AACTGGTGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACA 4924 Query 156525 TCAAACAATTGGCTCTGGAATGCGCTTCGAAACGTATGTACCCAGATATCATTAGTTCGG 156584 |||| ||| |||| ||||| ||||| || || |||||||| ||||| | | || | Sbjct 4923 TCAAGCAACTGGCACTGGATTGCGCCAGCAAGCGGATGTACCCGGATATTCTCAATTACG 4864 Query 156585 CTAATAACCGCCTTATCACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGCAG 156642 || | ||| |||| | | || | || | |||||||| || ||||| Sbjct 4863 ---ATCAGGTGGTTA----AGGTTACCG-GCTCGTTTAAGACGCCTATGGGCTGCCGCAG 4812 Query 156643 TTTCCTTAGTGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAACTT 156702 ||||||| | |||| |||| || | || || | || | ||||| || || ||| | Sbjct 4811 TTTCCTTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAACCT 4755 Query 156703 GGGTGTGGTGACAATTAACCTCCCGCGTATTGCTCTTGAAGCA 156745 || || | | | ||||| ||||| || || || |||||| Sbjct 4754 CGGGGTAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCA 4712 >seq3532 Length=11862 Score = 149 bits (164), Expect = 7e-31 Identities = 145/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 53416 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 53475 || ||||| || || ||||| |||||||| || || || || ||||| ||||||||||| Sbjct 11335 GTGGAAGGGGGGCAACACCTGAACGTGAACGTTCTGCGCCGTGAAACGCTGGAAGATGCG 11276 Query 53476 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 53535 || ||||| || || || ||||| ||||| || ||||| ||||| ||||||||||| || Sbjct 11275 GTAAAACACCCGGAAAAATACCCGCAGTTGACCATCCGTGTTTCTGGTTATGCAGTGCGT 11216 Query 53536 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAGC 53595 || || || |||| |||||||| || || ||||| || | | || || || |||||| Sbjct 11215 TTCAACTCATTGACCCCAGAACAGCAACGTGACGTGATTACGCGTACTTTCACTGAAAGC 11156 Query 53596 ATGTAAT 53602 |||||| Sbjct 11155 CTGTAAT 11149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576544201989120