Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031059.1 Length=38773 Score E Sequences producing significant alignments: (Bits) Value seq2694 304 3e-78 >seq2694 Length=15341 Score = 304 bits (336), Expect = 3e-78 Identities = 497/707 (70%), Gaps = 23/707 (3%) Strand=Plus/Plus Query 15334 GCTCCCGCATCACCGCGCTGCCGGCCAACCCCGACACGGCGCGGGGGTTCAGTGCCAATG 15393 |||| || || ||||| || ||||| ||||| || ||||| || || || ||||||| Sbjct 6137 GCTCGCGTATTACCGCACTCCCGGCGAACCCGGATACGGCACGCGGCTTTGCCGCCAATG 6196 Query 15394 TGATCCTCGACGAATTCGCCTTTCACGCCAAGTCGCGCGAGATCTGGGCGGCGCTCTTCC 15453 || | ||||| || || |||||||| ||| | ||| | |||||| ||||||| || | Sbjct 6197 TGTTTCTCGATGAGTTTGCCTTTCATGCCGACAGCCGCAAAATCTGGACGGCGCTGTTTC 6256 Query 15454 CGGTCGTGTCCAAGGGCGATCAGAAGCTGCGGGTGATCAGCACGCCCAACGGCAAGGGCA 15513 |||| | || || ||| | |||||||| || | | ||| || |||||||| |||| Sbjct 6257 CGGTGATATCGAACGGCTAC---AAGCTGCGCGTCACCTCCACCCCGAACGGCAAAGGCA 6313 Query 15514 ACAAGTTCTTCGAGCTGATGACGGCCGAG------GACAGTGTCTGGTCGCGCCATGTGG 15567 |||| |||| || |||||||| | | | || | |||||||| ||||||||| Sbjct 6314 ACAAATTCTATGAACTGATGACCGATGTGTCCTTAGATACCGTCTGGTCAAGCCATGTGG 6373 Query 15568 TCGATATCTACGAGGCCGTGCGCCA-GGGCTGCCCGCGCGATGTGG---ACATGC-TGCG 15622 | ||||||||| |||| || || | |||||||| ||||||| | | |||||| ||| Sbjct 6374 TGGATATCTACCAGGCGGTACGTGAAGGGCTGCC-GCGCGATATTGCCGACATGCGTGC- 6431 Query 15623 CGCCGGGATCGCGGACGAGGATGCCTGGGCGCAGGAATACGAGCTGAAATGGCTGGATGC 15682 |||| || || |||||||||| ||||||||||| | || || ||||||||||||| Sbjct 6432 CGCCCTGAACG---ACGAGGATGCGTGGGCGCAGGAGTTTGAACTCAAATGGCTGGATGA 6488 Query 15683 CGCCAGCGCCTGGCTCGATTACGACCTGATCTCCGCCTGCGAACGCGAGGAGGCCGGCAA 15742 || |||||||| || | ||||| | | || | || ||| || | Sbjct 6489 AGCATCAAGCTGGCTCGCCTATGCGCTGATTGATGGCGTAGAGCATGACTTGGCGGGTAT 6548 Query 15743 GCCAGAGCTTTACCAGGGCGGCCCCTGCTTCGTGGGGGTCGACATTGCGGCGCGCAACGA 15802 || || | || | |||||||| || || || || || || ||| | || | || Sbjct 6549 CCCCGAACACTATGCCGATGGCCCCTGTTTTGTCGGCGTTGATATCGCGACCCGTCATGA 6608 Query 15803 CCTGTTCGTGATCTGGGTGGTGGAAGAGACGGGCG--GCCGGCTGGTCACGCGCGAGGTG 15860 |||||| || || |||||| | || || ||||| | |||| |||||||| | Sbjct 6609 CCTGTTTGTCATTTGGGTGATTGAGCAGGTGGGCGATGTGTACTGG--ACGCGCGACATC 6666 Query 15861 ATTGCGCAAAAGCGGATCACATTCGCCGAACAGGACGCGCTGCTGGACGATGTCTTCCGC 15920 ||| | | || ||| ||| || ||||| |||||||||||||| || |||||||| Sbjct 6667 ATTACCCGCAAACGGGCCACCTTTGCCGAGCAGGACGCGCTGCTCGATGATGTCTTTTTT 6726 Query 15921 CGTTATCGCGTGGTGCGCGCGGGTATGGACCAGACCGGCATGGGCGAAAAACCGGTGGAG 15980 || || || || |||| | || ||||||||||||||||||||||| |||||||| Sbjct 6727 CGCTACCGGGTACTGCGTTGCTGCATTGACCAGACCGGCATGGGCGAAAAGCCGGTGGAA 6786 Query 15981 GACGCCAAGCGCCGCCATGGCGCGGCCCGCATCGACGGCGTGCTGTT 16027 || ||||| ||||| ||||| | ||| |||| || |||||||| Sbjct 6787 GATGCCAAACGCCGTCATGGTACCCATCGCGTCGAGGGGGTGCTGTT 6833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123946159381760