Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031081.1 Length=45206 Score E Sequences producing significant alignments: (Bits) Value seq2728 95.1 3e-15 >seq2728 Length=1005 Score = 95.1 bits (104), Expect = 3e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 5369 GCAGGGGAGCAAGCGCGCCCGCGCACTGGCAGCGATTGCACATAAACACGTCAAGCGCTG 5428 ||| || |||| ||||| |||||||| | || ||||| ||||| | ||||| Sbjct 26 GCAAGGCGGCAAACGCGCAGCGGCACTGGCGAAAGTCGCGCATAAGCACGTACACCGCTG 85 Query 5429 GATTAACCTTACCGGCACACCAGCGCCAAACGGGCTAAAAGACTTATGGGGTCAGACGTG 5488 ||| || || ||||| || || ||||| ||||| || | ||| | ||||| ||| | || Sbjct 86 GATGAATCTCACCGGTACGCCTGCGCCGAACGGCCTGATCGACCTGTGGGGCCAGTCATG 145 Query 5489 GTTTGTCGACGGTGGCGAACGCCTCGGCAGTAGCTATAAGGCATTTACCGACCGCTGGTT 5548 ||||||||| |||| | || ||||| ||| || | ||||| || ||||||||| Sbjct 146 GTTTGTCGATCATGGCCAGCGTCTCGGGCGTACCTTTGGCGCATTCACTTCCCGCTGGTT 205 Query 5549 CA 5550 || Sbjct 206 CA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144530789388288