Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq3480 150 5e-32 >seq3480 Length=19940 Score = 150 bits (166), Expect = 5e-32 Identities = 354/532 (67%), Gaps = 2/532 (0%) Strand=Plus/Minus Query 39370 GAGGTGGCACGGCGCGCTAAGACCGTGATCTTGTGCGCTCGTGAGTTTCAAGGCTCAATT 39429 || |||||| | | | |||||||| || | || || || || || || | || || Sbjct 18023 GAAGTGGCAAGAAGAACCAAGACCGTCATTCTTTGTGCGCGAGAATTGCAGGAATCTATC 17964 Query 39430 GAAGATTCTGTACATAAGTTATTAGCTGAGACAATAGAGCGTCTTGGCTATTTAAAAGAG 39489 || || || |||||| | || ||||| || || || |||||||| || Sbjct 17963 AGTGACTCGGTGCATAAGCTTCTACGGGAGACGATTGATCGCCTTGGCTACAGTGCCGAA 17904 Query 39490 TTTGAAATTCAGAATAAAACTATTACGCACTTGGGGACAGGTGCGACTTTTGTATTCTAT 39549 ||||| | ||||| || || |||| || | | || || |||| ||| | || | Sbjct 17903 TTTGAGGTACAGAAAAACACCATTATTCATCTTGCTACCGGAACGACATTTATCTTTTTA 17844 Query 39550 GGAATTAAGAACAACCCAACAAAGATCAAGTCAATTCAAGGTGTTGGTGT-TGCGTGGAT 39608 || | ||||| ||| || || | ||||| ||| ||||| ||| | ||| ||| | Sbjct 17843 GGCGTCAAGAATAACGTCACGAAAGTGAAGTCTGCTCAGGGTGTCGGTATCTGC-TGGGT 17785 Query 39609 TGAAGAGGCTGAGGCGGTAACAAAAAGATCATGGGATATTCTAATTCCGTCTATTCGTGG 39668 |||||| || || || || ||||| || ||||| || || | || || || || || Sbjct 17784 TGAAGAAGCGGAAGCCGTGACAAAGGACTCTTGGGACATCCTCTTGCCCTCAATACGCGG 17725 Query 39669 CGATAAGAACGCAAAGATTTTTATTACTTTTAACCCTGCCAATATTCTTGATGATACCTA 39728 ||||||||||| | | | ||| | ||||| ||| || || ||||||||||| || Sbjct 17724 AGATAAGAACGCCGAAGTGTGGATTTCCTTTAATCCTAAAAACATCCTTGATGATACGTA 17665 Query 39729 TCAAAGATTTATTGTTAATCCTCCTAAAAACTCATTAGTTTTGAAGGCTAATTACAATAA 39788 |||| |||| ||||||||||| || ||| | || | | |||||||||| |||| | Sbjct 17664 TCAACGATTCATTGTTAATCCGCCCAAAGGCGCAATCATCCTGAAGGCTAACTACAGCGA 17605 Query 39789 CAATATTTACTTTGATGAGTCGCCATTGCGTGAAGAAATGGAGGAATGCAAGGAAAAGGA 39848 ||| || || |||| || ||| | | | || | |||| ||| ||||| || || Sbjct 17604 TAATCCCTATTTCCATGACTCCCCACTCCCTCAACAGATGGCGGAGTGCAAAGAGCGTGA 17545 Query 39849 TTATGAGCTTTACTTGCATATATGGGAAGGCGAACCAGTTGCAGATAGTGAA 39900 | ||| || ||| ||||| ||| || || ||||| | || |||||| Sbjct 17544 TGTTGACCTGTACCGCCATATCTGGCTTGGGGAGCCAGTATCTGACAGTGAA 17493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143503637789952