Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq3839 163 4e-35 >seq3839 Length=10135 Score = 163 bits (180), Expect = 4e-35 Identities = 138/170 (81%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 200122 TCTATTTTCGGTGCACAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACC 200181 || |||||||| |||||||| |||||||| |||||||| || || ||||||| ||| Sbjct 1801 TCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGACGGTTTTCCGCTGGTGACCACC 1742 Query 200182 AAGAAGTGCCATCTCCGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACC 200241 ||| |||||||| || || |||||||||||||||||||||||||| |||||||||||| Sbjct 1741 AAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTTGTGGTTCCTCAACGGTGACACC 1682 Query 200242 AATATCAAGTATCTGAACGATAACAATGTCACCATTTGGGACGAATGGGC 200291 || | |||||| |||| || || || | ||||||||| |||||||| Sbjct 1681 AACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTGGGATGAATGGGC 1632 Score = 109 bits (120), Expect = 9e-19 Identities = 219/320 (68%), Gaps = 6/320 (2%) Strand=Plus/Minus Query 200839 CTTTCCTGTCAGCTGTATCAGCG-TAGCGCTGATATGTTTTTAGGCGTGCCGTTCAACAT 200897 |||||||||||||| || ||||| | | | |||| |||| | || |||||||||| || Sbjct 1408 CTTTCCTGTCAGCTTTACCAGCGCTCGTG-TGATGTGTTCCTCGGTCTGCCGTTCAATAT 1350 Query 200898 TGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCGGTGA 200957 ||| || ||||| ||| | || ||| | || || ||| | | | ||||| || Sbjct 1349 TGCCAGTTATGCACTGCTGGTGCATATGATGGCGCAGCAGTGCGACCTTGAAGTCGGCGA 1290 Query 200958 TTTCGTATGGACGGGTGGTGACGTACACATC--TACAGCAATCACGAAGAGCAGGTTCGT 201015 || || ||||| ||||||||| || |||| |||| ||| || |||||| | | Sbjct 1289 CTTTGTCTGGACCGGTGGTGAC--ACCCATCTGTACAACAACCATATGGAGCAGACGCAT 1232 Query 201016 CTGCAACTGTCTCGTGATCCGCGTCCTTTACCGAAGTTGAAAATTCTTCGTAAGCCGGAC 201075 |||||||| ||||| || | | ||||| |||| ||| || || | | Sbjct 1231 TTGCAACTGAGCCGTGAGCCAAAAGCGCTGCCGAAATTGATCATTAAACGCCGTCCTGCC 1172 Query 201076 TCTATCTTCGATTACAAGTTCGAAGACTTTGAGCTTACTGGTTACGAACCGCATCCTGCG 201135 || | || || || ||||||| || || || | || ||||| ||||||||||| Sbjct 1171 TCGCTGTTTGACTATCAGTTCGATGATTTCGAAATAGAAGGCTACGATCCGCATCCTGCC 1112 Query 201136 ATAAAAGCACCGGTGGCGAT 201155 || || |||||||||||||| Sbjct 1111 ATCAAGGCACCGGTGGCGAT 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783321145344000