Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq3839 187 9e-43 >seq3839 Length=10135 Score = 187 bits (206), Expect = 9e-43 Identities = 300/424 (71%), Gaps = 14/424 (3%) Strand=Plus/Minus Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977 || ||||||||||| |||||||| ||||| ||||| | || || || || || |||||| Sbjct 1654 GTTAGCATTTGGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAG 1595 Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTC-----ATCGATCAGATCCATGAAG 52032 |||||||| ||||| || ||||| | |||| || || || | || | Sbjct 1594 CAGTGGCGCGCTTGGGGCGC----GGCGG-ATGGTCGCCAGATTGACCAACTGCAAACCG 1540 Query 52033 TCGTCAAATCAATTAA-GAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAAT 52091 | | || || |||| | | ||||| || || || |||||| ||||| ||||| Sbjct 1539 TGCTGCAA-CAGTTAAAGCAGGATCCAAATTCACGCCGTATCATTGTTTCTGCCTGGAAC 1481 Query 52092 GTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTA 52151 |||||||| || ||| | |||||| |||| || |||||| | | ||||||||||| || Sbjct 1480 GTGGGTGAGTTAGATCAAATGGCGCTGGCACCGTGCCATGCGTTTTTCCAATTCTACGTG 1421 Query 52152 GCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTT 52211 || || || || ||||| || || | || ||||| || || ||||| | || | Sbjct 1420 GCGGATGGCAAACTTTCCTGTCAGCTTTACCAGCGCTCGTGTGATGTGTTCCTCGGTCTG 1361 Query 52212 CCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCT 52270 ||||| || |||||||| ||| | ||||| |||| |||| || | |||||| | ||| Sbjct 1360 CCGTTCAATATTGCCAGTTATGCACTGCTGGTGCATATGATGGCGC-AGCAGTGCGACCT 1302 Query 52271 TGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGA 52330 ||| || || || || | ||||| ||||| ||| |||| | |||||||||||| | || Sbjct 1301 TGAAGTCGGCGACTTTGTCTGGACCGGTGGTGACACCCATCTGTACAACAACCATATGGA 1242 Query 52331 TCAG 52334 ||| Sbjct 1241 GCAG 1238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190087042676480