Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 4e-13 >seq10 Length=2352850 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| ||||| |||||||| | || ||||| ||||| || | ||| || || Sbjct 821030 AATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACCATCACACTCGAAGTAGAGGCCTC 821089 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | || || ||||| ||||| || ||| |||| ||||| Sbjct 821090 TGACACAATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCTCCAGATCA 821149 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | || | ||| || |||||| |||||||| || |||| || |||| || || Sbjct 821150 ACAGCGTTTGATCTTTGCTGGTAAACAACTGGAAGATGGTAGAACTTTGTCCGACTACAA 821209 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || |||||||||||||| || || || | ||||| | |||||| Sbjct 821210 CATCCAGAAAGAATCTACACTCCACTTGGTTCTTCGTCTCAGAGGTGGC 821258 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||| || || ||||| ||||||||||| ||| ||||| ||| | Sbjct 819890 AATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATC 819949 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || || ||| | || ||| |||||| || |||||||| | || ||||| Sbjct 819950 TGACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCA 820009 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | || | || || ||||||||||| || | |||| | | || || || Sbjct 820010 ACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAA 820069 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || |||||||| || || || ||| | || | ||||| || || || Sbjct 820070 CATTCAAAAAGAGTCCACCCTCCATCTCGTTCTTCGTCTTCGAGGAGG 820117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421790801210368