Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq2351 165 9e-36 >seq2351 Length=10305 Score = 165 bits (182), Expect = 9e-36 Identities = 288/419 (69%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 143367 CATCAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACC 143426 |||||| | ||||||||| | || || || | ||||| | ||||| | || || || Sbjct 2996 CATCAGCTTGTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCC 2937 Query 143427 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143486 |||||| ||||| || ||||| |||| ||||||| |||||| | || ||| | Sbjct 2936 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAA 2877 Query 143487 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 143546 || || || ||||| || | || || ||||| || ||||| || || ||||||||||| Sbjct 2876 CGTTGCCGCTCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATG 2817 Query 143547 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 143606 ||| |||| |||||| || ||||| |||| || || ||| | ||| Sbjct 2816 TTTATAGAAAGGAATACAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAG 2757 Query 143607 AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTAT 143666 |||||||| ||| |||| || || ||||||||||| | |||| ||||| | || Sbjct 2756 CGCACGAATACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGAT 2697 Query 143667 TGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGA 143726 | | | || |||||| || | ||| |||||| ||||| | ||| || || Sbjct 2696 AGCACTGGAGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGA 2637 Query 143727 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCT 143785 || || ||||||||||| ||||| | || | ||| || || ||||| ||||||| || Sbjct 2636 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCT 2578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543640234106880