Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq205 145 6e-30 seq2392 93.3 3e-14 >seq205 Length=278284 Score = 145 bits (160), Expect = 6e-30 Identities = 234/330 (71%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 18807 TACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC-TGTCAATCAAACTATTT 18865 || || ||||| ||| | || | |||||| ||||| || ||| ||| | | | ||| Sbjct 26606 TATGGATTCCAATGGCGTCACTATGGAGCTGAATACAAGGACATGTTTACCGA-CTACAC 26664 Query 18866 ACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAA-CCCAGAAA 18924 | | ||||| || ||||| || |||| |||| | || ||||||||||| |||| | Sbjct 26665 AGATCAAGGGATTGATCAACTTCAAAACATTATTAACACCATTAAAACAAATCCCAATGA 26724 Query 18925 GCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTC 18984 | || |||| ||||| | ||||||| || | ||||| || ||||| ||||| | Sbjct 26725 TCGGA-GAATCATTATGTGTGCTTGGAACCCCATTGATATGCCTAAAATGGCCCTACCAC 26783 Query 18985 CATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACC 19044 | ||||| || ||||| || || ||| | ||| || | || || ||| |||||| Sbjct 26784 CTTGTCATTGCTTGGCACAGTTCTATGTGGCAGATGGTAAACTCTCGTGTCAACTATACC 26843 Query 19045 AGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTA 19104 ||||||| | |||||||| ||||| ||||| ||||||||||| | ||| || | || | Sbjct 26844 AGAGATCAGCCGATATGGGTCTTGGTGTACCATTCAACATTGCCAGTTATTCATTGCTGA 26903 Query 19105 CCTACATAGTAGCGCATGTTACAGGACTTA 19134 |||| || | || ||||| || || |||| Sbjct 26904 CCTATATGATTGCTCATGTCACTGG-CTTA 26932 >seq2392 Length=40786 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 ||||| || || ||| ||||| || | || || ||| ||||||||||||| | |||||| Sbjct 30154 CAGTTCTATGTGGCAGACGGTAAACTCTCGTGTCAACTATACCAGAGATCAGCTGATATG 30213 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 || ||||| ||||| ||||||||||| | ||| || | | ||||| || | || ||| Sbjct 30214 GGTCTTGGTGTACCATTCAACATTGCCAGTTATTCATTGTTGACCTATATGATTGCTCAT 30273 Query 19122 GTTACAGGACTTA 19134 || || || |||| Sbjct 30274 GTCACTGG-CTTA 30285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398715287717460