Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq205 145 5e-30 seq2392 96.9 2e-15 seq25611 82.4 6e-11 seq1112 82.4 6e-11 >seq205 Length=278284 Score = 145 bits (160), Expect = 5e-30 Identities = 241/344 (70%), Gaps = 8/344 (2%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 |||||||||||||||||| | || | | ||||| || |||||||| ||||| || || Sbjct 26926 AGTGACATGAGCAATCATATAGGTCAGCAATGAATAACTGGCAATGTTGAATGGTACACC 26867 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 | |||||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 26866 AAGACCCATATCGGCTGATCTCTGGTATAGTTGACACGAGAGTTTACCATCTGCCACATA 26807 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 || || || ||||||||| || | |||||||||| || || ||||| Sbjct 26806 GAACTGTGCCAAGCAATGACAAGGTGGTAGGGCCATTTTAGGCATATCAATGGGGTTCCA 26747 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTT 101991 ||||||||| | || || | ||| | || |||||||| || || | ||| | ||||| Sbjct 26746 AGCACACATAATGATTCTCCGATCATTGGGATTTGTTTTAATGGTGTTAAT--AATGTTT 26689 Query 101992 T--AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACA--CCTTTATATTCTGCTC 102047 | | ||| |||| |||| || | || | || |||| | || ||||| |||| Sbjct 26688 TGAAGTTGATCAATCCCTTGATCTGTGTAGT--CGGTAAACATGTCCTTGTATTCAGCTC 26631 Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 | | || | ||| || ||||||||||| || || | ||| ||| Sbjct 26630 CATAGTGACGCCATTGGAATCCATACACTGGACCTAAATCACCT 26587 >seq2392 Length=40786 Score = 96.9 bits (106), Expect = 2e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 |||||||||||||||||| | || || | ||||| || |||||||| ||||| || || Sbjct 30279 AGTGACATGAGCAATCATATAGGTCAACAATGAATAACTGGCAATGTTGAATGGTACACC 30220 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATC 101862 | ||||||||||||||||| || || |||||||| || || || || || Sbjct 30219 AAGACCCATATCAGCTGATCTCTGGTATAGTTGACACGAGAGTTTACCGTC 30169 >seq25611 Length=761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 101775 TTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTT 101834 |||| | ||||| |||||| |||||||| | |||||| ||||| || | || Sbjct 540 TTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAAATATCCGCACTACGTT 481 Query 101835 GATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAG 101894 |||| | |||||| || | || || || ||||||||| ||||| |||||||| Sbjct 480 GATATAATTGACAAGATAATTTATTATTTGCTACGTAAAATTGAAATAATATATGACAAG 421 Query 101895 GCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 | || || ||||||| |||| || ||||||||||| || Sbjct 420 GAGGTAATTTCATTTTATGAATATCGGAAACATTCCAGGC 381 >seq1112 Length=102550 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 101775 TTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTT 101834 |||| | ||||| |||||| |||||||| | |||||| ||||| || | || Sbjct 24578 TTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAAATATCCGCACTACGTT 24637 Query 101835 GATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAG 101894 |||| | |||||| || | || || || ||||||||| ||||| |||||||| Sbjct 24638 GATATAATTGACAAGATAATTTATTATTTGCTACGTAAAATTGAAATAATATATGACAAG 24697 Query 101895 GCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 | || || ||||||| |||| || ||||||||||| || Sbjct 24698 GAGGTAATTTCATTTTATGAATATCGGAAACATTCCAGGC 24737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360538007494988