Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq204 104 3e-17 >seq204 Length=278841 Score = 104 bits (114), Expect = 3e-17 Identities = 136/185 (74%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || ||||| ||||| ||||| || || |||||||| || || || ||||| || Sbjct 80639 AATGTTAGTCCAGGCATGAGGCCGCGTTTCTTAAGCCAGAAGATAGATGCAAAGCTCCCG 80580 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG-CGCT 24304 || ||||| ||||| ||||| || || || |||| ||| |||||| | | |||| Sbjct 80579 GAGAAGAAGATTCCCTCTACACTGGCGAATGCTATAACTCTCTCTCCAAATGAAGACGCT 80520 Query 24305 GTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361 |||| | ||||| | | ||||| || |||||||| |||||||| ||||||||||| Sbjct 80519 -TCATCTGCAATCCAGCGTAGCGCCCAGTCTGCCTTCTTCTTTACACATGGCATTGTCTC 80461 Query 24362 TATAG 24366 |||| Sbjct 80460 AATAG 80456 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 ||||| | ||| ||||| || | ||||| |||||||||||||| || |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740 ||||| || ||||||||||| || || || ||||| | | |||||| | | |||| Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATTATCTCTCAGGAGA 77740 Query 24741 GGTTC 24745 ||||| Sbjct 77739 GGTTC 77735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592519402818240