Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq205 159 5e-34 seq3053 102 1e-16 seq2392 93.3 6e-14 seq25611 91.5 2e-13 seq1112 91.5 2e-13 >seq205 Length=278284 Score = 159 bits (176), Expect = 5e-34 Identities = 244/346 (71%), Gaps = 9/346 (3%) Strand=Plus/Minus Query 205443 AGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACC 205502 ||| | ||| ||||||||||| |||| || |||||| |||| || ||||||||||| Sbjct 26926 AGTGACATGAGCAATCATATAGGTCAGCAATGAATAACTGGCAATGTTGAATGGTACACC 26867 Query 205503 TAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTAC 205562 | ||||||||| |||||||| || || | |||||| | || |||| || || Sbjct 26866 AAGACCCATATCGGCTGATCTCTGGTATAGTTGACACGAGAG---TTTACCATCTGCCAC 26810 Query 205563 ATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATT 205622 || || ||| | || |||||||||||||||| |||| || | ||| || || || Sbjct 26809 ATAGAACTGTGCCAAGCAATGACAAGGTGGTAGGGCCATTTTAGGCATATCAATGGGGTT 26750 Query 205623 CCAGGCTGTTAATATTATATTTCTAGATTCA---GGtttattttttattttatttatAAT 205679 ||| || | || || |||| ||| || || |||| || | || ||||| Sbjct 26749 CCAAGCAC---ACATAATGATTCTCCGATCATTGGGATTTGTTTTAATGGTGTTAATAAT 26693 Query 205680 ATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGC 205739 | | | |||||||| ||||||| ||| || | ||| ||| || | |||| ||| Sbjct 26692 GTTTTGAAGTTGATCAATCCCTTGATCTGTGTAGTCGGTAAACATGTCCTTGTATTCAGC 26633 Query 205740 ACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 ||| | ||||||||||| || ||||| |||||||||||||||||| Sbjct 26632 TCCATAGTGACGCCATTGGAATCCATACACTGGACCTAAATCACCT 26587 >seq3053 Length=52643 Score = 102 bits (112), Expect = 1e-16 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||||||||| | || || || || || ||||| || || |||| ||||| | Sbjct 11918 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 11977 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | ||| || || ||||| || |||||||| || ||||| || Sbjct 11978 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 12037 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || ||||| || ||||| ||||| || ||| | || || || ||||| || Sbjct 12038 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 12097 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAA 124772 || || |||||||| || | || ||||| | ||| | || || || || |||| Sbjct 12098 CATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGGGGCTACTAAA 12153 Score = 102 bits (112), Expect = 1e-16 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||||||||| | || || || || || ||||| || || |||| ||||| | Sbjct 35578 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 35637 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | ||| || || ||||| || |||||||| || ||||| || Sbjct 35638 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 35697 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || ||||| || ||||| ||||| || ||| | || || || ||||| || Sbjct 35698 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 35757 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAA 124772 || || |||||||| || | || ||||| | ||| | || || || || |||| Sbjct 35758 CATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGGGGCTACTAAA 35813 >seq2392 Length=40786 Score = 93.3 bits (102), Expect = 6e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 205443 AGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACC 205502 ||| | ||| ||||||||||| ||||| || |||||| |||| || ||||||||||| Sbjct 30279 AGTGACATGAGCAATCATATAGGTCAACAATGAATAACTGGCAATGTTGAATGGTACACC 30220 Query 205503 TAAACCCATATCAGCTGATCTTTGATACATTTGACA 205538 | |||||||||||||||||| || || | |||||| Sbjct 30219 AAGACCCATATCAGCTGATCTCTGGTATAGTTGACA 30184 >seq25611 Length=761 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/248 (69%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 205450 TGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCC 205509 ||||| || |||| | | ||||| ||| ||||| ||||||||||| |||||| Sbjct 556 TGTGCTATTATATGAATTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAA 497 Query 205510 ATATCAGCTGATCTTTGATACATTTGACATGTAAGATA-TTTATTATTAATTACATGAAA 205568 ||||| || | |||||| | |||||| ||||| ||||||||| ||| | ||| Sbjct 496 ATATCCGCACTACGTTGATATAATTGACA----AGATAATTTATTATTTGCTACGTAAAA 441 Query 205569 TTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGC 205628 ||| | || ||||||||| |||| ||| || | || ||| | ||||||||| Sbjct 440 TTGAAATAATATATGACAAGGAGGTAATTTCATTTTATGAATATCGGAAACATTCCAGGC 381 Query 205629 TGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAA 205688 || | || || | | ||| | ||| | | |||| |||| ||||||| || || Sbjct 380 TGAAACAATAATTCTACGAGAATTAGGATCAGTTTTAATTTGTTTTATAACCCCTGACAA 321 Query 205689 TTGATCAA 205696 |||||||| Sbjct 320 TTGATCAA 313 >seq1112 Length=102550 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/248 (69%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 205450 TGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCC 205509 ||||| || |||| | | ||||| ||| ||||| ||||||||||| |||||| Sbjct 24562 TGTGCTATTATATGAATTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAA 24621 Query 205510 ATATCAGCTGATCTTTGATACATTTGACATGTAAGATA-TTTATTATTAATTACATGAAA 205568 ||||| || | |||||| | |||||| ||||| ||||||||| ||| | ||| Sbjct 24622 ATATCCGCACTACGTTGATATAATTGACA----AGATAATTTATTATTTGCTACGTAAAA 24677 Query 205569 TTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGC 205628 ||| | || ||||||||| |||| ||| || | || ||| | ||||||||| Sbjct 24678 TTGAAATAATATATGACAAGGAGGTAATTTCATTTTATGAATATCGGAAACATTCCAGGC 24737 Query 205629 TGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAA 205688 || | || || | | ||| | ||| | | |||| |||| ||||||| || || Sbjct 24738 TGAAACAATAATTCTACGAGAATTAGGATCAGTTTTAATTTGTTTTATAACCCCTGACAA 24797 Query 205689 TTGATCAA 205696 |||||||| Sbjct 24798 TTGATCAA 24805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753926314918400