Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq3053 84.2 3e-11 seq2046 84.2 3e-11 >seq3053 Length=52643 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| || | ||| ||||| || | ||||||||||| || || ||||| | Sbjct 11919 TTCCTCCTCTCAGACGTAAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAG 11860 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | || | | ||| || ||||| |||||||| ||||| | | |||||| || |||| Sbjct 11859 ACAAGGTACGTCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGAG 11800 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || ||||| || ||||| Sbjct 11799 GGATACCTTCCTTGTCTTG 11781 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| || | ||| ||||| || | ||||||||||| || || ||||| | Sbjct 35579 TTCCTCCTCTCAGACGTAAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAG 35520 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | || | | ||| || ||||| |||||||| ||||| | | |||||| || |||| Sbjct 35519 ACAAGGTACGTCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGAG 35460 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || ||||| || ||||| Sbjct 35459 GGATACCTTCCTTGTCTTG 35441 >seq2046 Length=51042 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 195418 GATCAAGTTAAAGTAATTATTTTAGGTCAGGATCCTTATCCTACTGTTGGAATGGCTGAT 195477 ||| | |||||||| ||||||||||| || |||||||||| ||| ||||| ||| || Sbjct 16313 GATTATGTTAAAGTTATTATTTTAGGCCAAGATCCTTATCATACACCAGGAATTGCT-AT 16371 Query 195478 GGTTTAGCATTTTCCTGTT-CTAATAATAGTAATTATATTCCT 195519 || ||| |||| ||||| | ||||| ||||||||||| ||| Sbjct 16372 GGGTTATTGTTTTTCTGTTCCAAATAACAGTAATTATATACCT 16414 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 195418 GATCAAGTTAAAGTAATTATTTTAGGTCAGGATCCTTATCCTACTGTTGGAATGGCTGAT 195477 ||| | |||||||| ||||||||||| || |||||||||| ||| ||||| ||| || Sbjct 22736 GATTATGTTAAAGTTATTATTTTAGGCCAAGATCCTTATCATACACCAGGAATTGCT-AT 22794 Query 195478 GGTTTAGCATTTTCCTGTT-CTAATAATAGTAATTATATTCCT 195519 || ||| |||| ||||| | ||||| ||||||||||| ||| Sbjct 22795 GGGTTATTGTTTTTCTGTTCCAAATAACAGTAATTATATACCT 22837 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 195418 GATCAAGTTAAAGTAATTATTTTAGGTCAGGATCCTTATCCTACTGTTGGAATGGCTGAT 195477 ||| | |||||||| ||||||||||| || |||||||||| ||| ||||| ||| || Sbjct 29019 GATTATGTTAAAGTTATTATTTTAGGCCAAGATCCTTATCATACACCAGGAATTGCT-AT 29077 Query 195478 GGTTTAGCATTTTCCTGTT-CTAATAATAGTAATTATATTCCT 195519 || ||| |||| ||||| | ||||| ||||||||||| ||| Sbjct 29078 GGGTTATTGTTTTTCTGTTCCAAATAACAGTAATTATATACCT 29120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742020870568960