Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq205 181 8e-41 seq2392 87.8 1e-12 seq25611 82.4 6e-11 seq1112 82.4 6e-11 >seq205 Length=278284 Score = 181 bits (200), Expect = 8e-41 Identities = 245/339 (72%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||||| ||||| ||||||||||| |||||| | || | |||||||||||| ||| Sbjct 26588 GGTGATTTAGGTCCAGTGTATGGATTCCAATGGCGTCACTATGGAGCTGAATACAAGGAC 26647 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| || | || | ||||| | |||||| | ||||| ||||||| ||| Sbjct 26648 ATGTTTACCGACTACACAGATCAAGGGATTGATCAACTTCAAAACATTATTAACACCATT 26707 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| || || || || | ||||| ||| | || || |||||| | | ||| ||||| Sbjct 26708 AAAACAAATCCCAATGATCGGAGAATCATTATGTGTGCTTGGAACCCCATTGATATGCCT 26767 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATT 20456 |||||| | || || |||||| |||| || || || || || || || | || | Sbjct 26768 AAAATGGCCCTACCACCTTGTCAT-TGCTTGGCACAGTTCTATGTGGCAGATGGTAAACT 26826 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||||||||| | || || |||| || |||||||| || ||||| || ||||| ||||| Sbjct 26827 CTCGTGTCAACTATACCAGAGATCAGCCGATATGGGTCTTGGTGTACCATTCAACATTGC 26886 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||| | |||| || ||||||||||| ||||| || Sbjct 26887 CAGTTATTCATTGCTGACCTATATGATTGCTCATGTCAC 26925 Score = 86.0 bits (94), Expect = 5e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 20056 ACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGA 20115 ||||| || || |||||||||||||| || |||||||||||| | ||||| |||||||| Sbjct 26325 ACTACAAAGCGAGTATTTTGGAAAGGAGTCGTTGAAGAGTTACTTTGGTTCATTAAAGGT 26384 Query 20116 TCAACAAATTCTACCGAGCTTGT-AGAAAAAGGAGTTAAGATTTGG 20160 || || ||| | | || |||| ||| |||||||| || || ||| Sbjct 26385 TCTACCAATGCCAAGGA-ATTGTCAGACAAAGGAGTCAAAATCTGG 26429 >seq2392 Length=40786 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 ||||||||| | || || |||| ||||||||||| || ||||| || ||||| ||||| Sbjct 30181 TCGTGTCAACTATACCAGAGATCAGCTGATATGGGTCTTGGTGTACCATTCAACATTGCC 30240 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||| | || | || ||||||||||| ||||| || Sbjct 30241 AGTTATTCATTGTTGACCTATATGATTGCTCATGTCAC 30278 >seq25611 Length=761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 20323 GTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAAC 20382 ||||| || ||||||||| | || || | ||||||||| | | |||||||| Sbjct 330 GTTATAAAACAAATTAAAACTGATCCTAATTCTCGTAGAATTATTGTTTCAGCCTGGAAT 389 Query 20383 GCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442 | | ||| | | | |||| || ||||| |||||||| ||| ||||||||||| Sbjct 390 GTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAATTTTACGTA 449 Query 20443 GCTAATAATGAATTGTCGTGTCAAATGTATCAACG 20477 || |||||| |||| || |||||| | |||||||| Sbjct 450 GCAAATAATAAATTATCTTGTCAATTATATCAACG 484 >seq1112 Length=102550 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 20323 GTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAAC 20382 ||||| || ||||||||| | || || | ||||||||| | | |||||||| Sbjct 24788 GTTATAAAACAAATTAAAACTGATCCTAATTCTCGTAGAATTATTGTTTCAGCCTGGAAT 24729 Query 20383 GCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442 | | ||| | | | |||| || ||||| |||||||| ||| ||||||||||| Sbjct 24728 GTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAATTTTACGTA 24669 Query 20443 GCTAATAATGAATTGTCGTGTCAAATGTATCAACG 20477 || |||||| |||| || |||||| | |||||||| Sbjct 24668 GCAAATAATAAATTATCTTGTCAATTATATCAACG 24634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398395919470660