Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1195 111 1e-19 seq288 111 1e-19 >seq1195 Length=97530 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| ||||||||||| || | | | || ||| Sbjct 68619 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 68678 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || ||||| |||| || ||||| || ||||| | ||||||||||| | Sbjct 68679 AGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCTTGA 68738 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||||| || || ||||| Sbjct 68739 ATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTT 68798 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || || || ||||| Sbjct 68799 CCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| ||||||||||| || ||| ||||||||| ||||||||||| || | | Sbjct 71440 TCTCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 71499 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || |||| ||||| ||||| || |||| |||||||| ||||| || | |||||||| Sbjct 71500 ATCCTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTT 71559 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | |||| | ||||||||||| || || Sbjct 71560 GTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 71619 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||| ||||| || || || ||||| Sbjct 71620 GGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||||||||| ||||||||||| || | | | Sbjct 71668 TCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACC 71727 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||| ||||| || || || |||| |||||||| |||||||| | |||||||| Sbjct 71728 ATCTTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTT 71787 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | | |||| | ||||||||||| || || Sbjct 71788 GTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 71847 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| ||||| || || || ||||| Sbjct 71848 GGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||||||||| ||||||||||| || | | Sbjct 72124 TCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 72183 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||||||||| || ||||| |||| || ||||| || ||||| | |||||||| Sbjct 72184 ATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTT 72243 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | |||| | ||||||||||| || || Sbjct 72244 GTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 72303 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||| ||||| || || |||||||| Sbjct 72304 GGTCTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| ||||||||||| || | | | || ||| Sbjct 71903 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 71962 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || || || |||| |||||||| || ||||| | ||||||||||| | Sbjct 71963 AGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGGATTCCCTCCTTGTCTTGA 72022 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||| |||| || || ||||| Sbjct 72023 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGTCTTT 72082 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| || || || || ||||| Sbjct 72083 CCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 >seq288 Length=257319 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||||||||| ||||||||||| || | | Sbjct 247138 TCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 247079 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||||||||| || || || |||| || ||||| |||||||| | |||||||| Sbjct 247078 ATCTTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTT 247019 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | |||| | ||||||||||| || || Sbjct 247018 GTCTTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 246959 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||||||| |||| ||| || |||||||| ||||| || Sbjct 246958 GGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCATCTT 246920 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||||||||| ||||||||||| || | | | Sbjct 247366 TCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACC 247307 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||||||||| || ||||| |||| || ||||| || ||||| | |||||||| Sbjct 247306 ATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTT 247247 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | |||| | ||||||||||| || || Sbjct 247246 GTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGAT 247187 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || |||| ||| || || || || ||||| Sbjct 247186 GGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| || | | | || ||||||||||| || || || Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| |||||||| |||||||| | ||||||||||| ||| || ||| || Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTT 257200 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||||||||||| || || |||||||| |||| ||| || || Sbjct 257199 TCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 257140 Query 45326 AAGATTTGCAT 45336 || || ||||| Sbjct 257139 AAAATCTGCAT 257129 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 ||| || ||||| || || ||| ||||||||| ||||||||||| || | | Sbjct 247594 TCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 247535 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||||||||| || ||||| |||| || ||||| || ||||| | |||||||| Sbjct 247534 ATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTT 247475 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 ||| ||| || ||| || | | | |||| | |||||| |||| || || Sbjct 247474 GTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGAT 247415 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || |||| ||| || || || || ||||| Sbjct 247414 GGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394295231181748