Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq204 104 3e-17 >seq204 Length=278841 Score = 104 bits (114), Expect = 3e-17 Identities = 152/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| || | ||| ||| || || ||||| ||||| ||||| || || | Sbjct 80668 CCTCATCTCTTGAGATCAGTTCATTACTGAATGTTAGTCCAGGCATGAGGCCGCGTTTCT 80609 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 ||||||| || || || || || ||||| ||||||||||| ||||| || || | Sbjct 80608 TAAGCCAGAAGATAGATGCAAAGCTCCCGGAGAAGAAGATTCCCTCTACACTGGCGAATG 80549 Query 33724 CAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCG 33779 | |||| |||||||||| | | |||| |||| | ||||| | | ||||| || Sbjct 80548 CTATAACTCTCTCTCCAAATGAAGACGCT-TCATCTGCAATCCAGCGTAGCGCCCAGTCT 80490 Query 33780 GCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811 |||||||| |||||||| ||||| || || || Sbjct 80489 GCCTTCTTCTTTACACATGGCATTGTCTCAAT 80458 Score = 100 bits (110), Expect = 4e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 ||||| | ||| ||||| || | ||||| |||||||||||||| || |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATA 34187 ||||| || |||||||| || ||||| || ||||| | | |||||| | |||| | Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATTATCTCTCAGGAGA 77740 Query 34188 GGTTC 34192 ||||| Sbjct 77739 GGTTC 77735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628542313832640