Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq204 104 3e-17 >seq204 Length=278841 Score = 104 bits (114), Expect = 3e-17 Identities = 136/185 (74%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || ||||| ||||| ||||| || || |||||||| || || || ||||| || Sbjct 80639 AATGTTAGTCCAGGCATGAGGCCGCGTTTCTTAAGCCAGAAGATAGATGCAAAGCTCCCG 80580 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CACT 36327 || ||||| ||||| ||||| || || || |||| |||||||||| | | | || Sbjct 80579 GAGAAGAAGATTCCCTCTACACTGGCGAATGCTATAACTCTCTCTCCAAATGAAGACGCT 80520 Query 36328 GTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 |||| | ||||| | | ||||| || |||||||| |||||||| ||||||||||| Sbjct 80519 -TCATCTGCAATCCAGCGTAGCGCCCAGTCTGCCTTCTTCTTTACACATGGCATTGTCTC 80461 Query 36385 TATAG 36389 |||| Sbjct 80460 AATAG 80456 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 ||||| | ||| ||||| || | ||||| |||||||||||||| || |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||||| || ||||||||||| || || || ||||| Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAA 77765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656840098805920