Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq204 113 6e-20 >seq204 Length=278841 Score = 113 bits (124), Expect = 6e-20 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 ||||| | ||||||||| ||| | ||||| |||||||| ||||| || |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATT 42657 |||||||| ||||||||||| ||||| || ||||| | | |||||| Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATT 77753 Score = 104 bits (114), Expect = 3e-17 Identities = 152/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || | ||| || || || ||||| ||||| ||||| || || | Sbjct 80668 CCTCATCTCTTGAGATCAGTTCATTACTGAATGTTAGTCCAGGCATGAGGCCGCGTTTCT 80609 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 ||||||| || ||||| ||||| || || ||||||||||| ||||| || || | Sbjct 80608 TAAGCCAGAAGATAGATGCAAAGCTCCCGGAGAAGAAGATTCCCTCTACACTGGCGAATG 80549 Query 42207 CAATAAGTCTCTCTCCATA-ACCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCG 42262 | |||| |||||||||| | | | || |||| | ||||| | | ||||| || Sbjct 80548 CTATAACTCTCTCTCCAAATGAAGACGCT-TCATCTGCAATCCAGCGTAGCGCCCAGTCT 80490 Query 42263 GCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 |||||||| |||||||| ||||| || || || Sbjct 80489 GCCTTCTTCTTTACACATGGCATTGTCTCAAT 80458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669780243790880