Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1195 82.4 6e-11 seq288 82.4 6e-11 >seq1195 Length=97530 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | || || || |||||||| ||| |||||| || |||||||| |||| Sbjct 71656 ACCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 71715 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | || ||||| || ||||| | | || | |||||| ||||| || Sbjct 71716 GAGGGTTCTACCATCTTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGG 71775 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||| ||| || ||||| | | | ||||| || | || |||| Sbjct 71776 GATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCAC 71835 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || || || || || || || ||||||||||| Sbjct 71836 CTCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 >seq288 Length=257319 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | || || || |||||||| ||| |||||| || |||||||| |||| Sbjct 247378 ACCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 247319 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | || ||||| || ||||| || | || | ||| || ||||| || Sbjct 247318 GAGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGG 247259 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||| ||| || ||||| | ||||| |||| || |||| Sbjct 247258 GATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCAC 247199 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || || || | |||||| || ||||||||||| Sbjct 247198 CTCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420419553769988