Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq1337 84.2 1e-11 >seq1337 Length=71271 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 72381 GCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCA 72440 || || |||||| | ||||| || | || || ||| | ||||| || ||| ||| Sbjct 54249 GCTTTATCACAATTAAATCGTTCTTTAGAGCAACGTCAAAATAAACGTCCTATAATGTCA 54190 Query 72441 GATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGC 72500 |||||||||||||| || || ||||| || || || || | ||| | ||| | ||||| Sbjct 54189 GATTTACGTGAATCTGGTGCCATTGAACAAGATGCTGATGTTATTTTATTTATATATCGT 54130 Query 72501 GACGAAGTTTATCACCCGGAT--AGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAA 72558 || ||||||||| | | || ||| | || || |||||||| | ||| | | | Sbjct 54129 GATGAAGTTTATAATCAAAATTCAGCTGA--CAAAGGTATTGCCGAAATTATTGTTAGTA 54072 Query 72559 AGCAACGAAATGGCCCAATTGG 72580 | || || ||||| |||||||| Sbjct 54071 AACAGCGTAATGGTCCAATTGG 54050 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 72381 GCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTAAATTCA 72440 || || |||||| | ||||| || | || || ||| | ||||| || ||| ||| Sbjct 61040 GCTTTATCACAATTAAATCGTTCTTTAGAGCAACGTCAAAATAAACGTCCTATAATGTCA 60981 Query 72441 GATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGC 72500 |||||||||||||| || || ||||| || || || || | ||| | ||| | ||||| Sbjct 60980 GATTTACGTGAATCTGGTGCCATTGAACAAGATGCTGATGTTATTTTATTTATATATCGT 60921 Query 72501 GACGAAGTTTATCACCCGGAT--AGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAA 72558 || ||||||||| | | || ||| | || || |||||||| | ||| | | | Sbjct 60920 GATGAAGTTTATAATCAAAATTCAGCTGA--CAAAGGTATTGCCGAAATTATTGTTAGTA 60863 Query 72559 AGCAACGAAATGGCCCAATTGG 72580 | || || ||||| |||||||| Sbjct 60862 AACAGCGTAATGGTCCAATTGG 60841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 302636544350148