Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq205 104 3e-17 seq25611 82.4 9e-11 seq1112 82.4 9e-11 >seq205 Length=278284 Score = 104 bits (114), Expect = 3e-17 Identities = 227/335 (68%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 |||||||| | ||| || | |||| |||| || | || || |||||||| | ||| Sbjct 26919 TGAGCAATCATATAGGTCAGCAATGAATAACTGGCAATGTTGAATGGTACACCAAGACCC 26860 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGA 7017 ||||| |||||||| || || |||||| || | || ||| |||| || || Sbjct 26859 ATATCGGCTGATCTCTGGTATAGTTGACACGAGAGTTTACCATCTGCCACATAGAACTGT 26800 Query 7018 CACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTC 7077 ||| |||||| || |||| | | | |||||| || ||||||||| | Sbjct 26799 GCCAAGCAATGACAAGGTGGTAGGGCCATTTTAGGCATATCAATGGGGTTCCAAGCACAC 26740 Query 7078 ATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTA-TAATTATTTGTAATTG 7136 || | || | | |||||| ||||||||||| ||| ||||| |||| |||| | ||| Sbjct 26739 ATAATGATTCTCCGATCATTGGGATTTGTTTT-AATGGTGTTAATAATGTTTTGAAGTTG 26681 Query 7137 ATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATT-AGCTCCAAAATGTC 7195 ||| || || ||| || || | ||| ||| | | ||| ||||||| | || | Sbjct 26680 ATCAATCCCTTGATCTGTGTAGTCGGTAA-ACATGTCCTTGTATTCAGCTCCATAGTGAC 26622 Query 7196 TCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 |||||| || ||||| | ||||||||||||||| Sbjct 26621 GCCATTGGAATCCATACACTGGACCTAAATCACCT 26587 >seq25611 Length=761 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 || || |||| || ||||||| | ||| ||||| | |||||| |||| ||||| Sbjct 556 TGTGCTATTATATGAATTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAA 497 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGA 7017 ||||| || | |||||| ||||||||||||| |||| | | | ||||||||| Sbjct 496 ATATCCGCACTACGTTGATATAATTGACAAGATAATTTATTATTTGCTACGTAAAATTGA 437 Query 7018 CACAATACATGACATGGAGGTAA 7040 | |||| |||||| |||||||| Sbjct 436 AATAATATATGACAAGGAGGTAA 414 >seq1112 Length=102550 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 || || |||| || ||||||| | ||| ||||| | |||||| |||| ||||| Sbjct 24562 TGTGCTATTATATGAATTAATAACGAATATGAAGCAATATTAAATGGTAATCCTAAAAAA 24621 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGA 7017 ||||| || | |||||| ||||||||||||| |||| | | | ||||||||| Sbjct 24622 ATATCCGCACTACGTTGATATAATTGACAAGATAATTTATTATTTGCTACGTAAAATTGA 24681 Query 7018 CACAATACATGACATGGAGGTAA 7040 | |||| |||||| |||||||| Sbjct 24682 AATAATATATGACAAGGAGGTAA 24704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594665448580800