Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 seq12847 114 7e-21 seq181 113 2e-20 seq735 111 8e-20 seq167 111 8e-20 seq12866 109 3e-19 seq7449 109 3e-19 seq995 109 3e-19 >seq1 Length=1098238 Score = 120 bits (132), Expect = 2e-22 Identities = 83/93 (89%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 73066 TAAAAAAT---ATTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGA 73122 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC-GTCGA 11534 |||||| |||||||||||||||||||| ||||| Sbjct 73123 CGCTCTAACCAACTGAGCTAATGGGCCAGTCGA 73155 Score = 116 bits (128), Expect = 2e-21 Identities = 78/87 (90%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 72750 TAAAAAATC---TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGA 72694 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 72693 CGCTCTAACCAACTGAGCTAATGGGCC 72667 >seq12847 Length=1412 Score = 114 bits (126), Expect = 7e-21 Identities = 77/86 (90%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 490 AAAAAAT---ATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 546 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 547 GCTCTAACCAACTGAGCTAATGGGCC 572 >seq181 Length=286055 Score = 113 bits (124), Expect = 2e-20 Identities = 81/92 (88%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 11439 TTAA-TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| |||||||| |||||||||| |||||||||| |||||||||||||||||| Sbjct 185306 TTAAGTAAAAAATT---TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAG 185250 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| |||||||||||||||||||| Sbjct 185249 CACGACGCTCTAACCAACTGAGCTAATGGGCC 185218 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 165329 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 165270 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 165269 CTGAGCTAATGGGCC 165255 >seq735 Length=145936 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 36457 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 36398 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 36397 CTGAGCTAATGGGCC 36383 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 36601 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 36542 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 36541 TGAGCTAATGGGCC 36528 >seq167 Length=295119 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 61619 TGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 61560 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 61559 TGAGCTAATGGGCCG 61545 >seq12866 Length=1409 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 652 TGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 711 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 712 TGAGCTAATGGGCC 725 >seq7449 Length=18981 Score = 109 bits (120), Expect = 3e-19 Identities = 72/79 (91%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct 9234 AAATGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAA 9175 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 9174 CCAACTGAGCTAATGGGCC 9156 >seq995 Length=204885 Score = 109 bits (120), Expect = 3e-19 Identities = 72/79 (91%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct 68724 AAATGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAA 68665 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 68664 CCAACTGAGCTAATGGGCC 68646 Lambda K H 0.639 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260974956555088