Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1427 196 8e-46 seq5034 192 9e-45 seq2842 192 9e-45 seq2703 168 1e-37 seq91229 96.9 5e-16 seq122926 82.4 1e-11 >seq1427 Length=132151 Score = 196 bits (216), Expect = 8e-46 Identities = 204/268 (76%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || | | | ||| || || |||||||| ||||||||||| || || || Sbjct 120139 CGCCAAGCGGCACAGGAAAGTTCTCCGTGACAACATCCAGGGAATCACCAAACCCGCCAT 120080 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||| ||||| ||||||||||||||| |||| ||| | |||| ||||||| Sbjct 120079 CCGTCGTCTGGCGCGTCGAGGTGGAGTCAAGCGTATCTCCGGACTCATCTACGAAGAGAC 120020 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | |||||| ||| ||| |||| || || || ||| ||||| Sbjct 120019 CCGTGGCGTTCTCAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 119960 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| ||||||| |||| || || | ||||||||||| Sbjct 119959 GCACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTATACGCGCTCAAACGTCAAGG 119900 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 119899 CCGCACACTGTACGGTTTCGGCGGTTAA 119872 Score = 192 bits (212), Expect = 9e-45 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct 119428 CTCCGTGACAACATCCAGGGAATCACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 119369 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||||||| |||| || | |||| || |||| |||| ||| | ||| | ||| Sbjct 119368 GGAGTCAAGCGTATCTCCGGGCTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGTTC 119309 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 119308 CTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 119249 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| ||||||| ||||||| || | |||||||||||||| | | || ||||| || Sbjct 119248 ACCGCCATGGACGTCGTCTACGCGCTCAAACGTCAAGGCCGCACCCTGTACGGTTTCGGC 119189 Query 16694 AGTTAA 16699 ||||| Sbjct 119188 GGTTAA 119183 >seq5034 Length=9121 Score = 192 bits (212), Expect = 9e-45 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct 6370 CTCCGTGACAACATCCAGGGAATCACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 6429 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||||||| |||| || | |||| || |||| |||| ||| | ||| | ||| Sbjct 6430 GGAGTCAAGCGTATCTCCGGGCTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGTTC 6489 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 6490 CTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 6549 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| ||||||| ||||||| || | |||||||||||||| | | || ||||| || Sbjct 6550 ACCGCCATGGACGTCGTCTACGCGCTCAAACGTCAAGGCCGCACCCTGTACGGTTTCGGC 6609 Query 16694 AGTTAA 16699 ||||| Sbjct 6610 GGTTAA 6615 >seq2842 Length=26966 Score = 192 bits (212), Expect = 9e-45 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct 3013 CTCCGTGACAACATCCAGGGAATCACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 2954 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||||||| |||| || | |||| || |||| |||| ||| | ||| | ||| Sbjct 2953 GGAGTCAAGCGTATCTCCGGGCTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGTTC 2894 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 2893 CTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 2834 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| ||||||| ||||||| || | |||||||||||||| | | || ||||| || Sbjct 2833 ACCGCCATGGACGTCGTCTACGCGCTCAAACGTCAAGGCCGCACCCTGTACGGTTTCGGC 2774 Query 16694 AGTTAA 16699 ||||| Sbjct 2773 GGTTAA 2768 Score = 192 bits (212), Expect = 9e-45 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct 21195 CTCCGTGACAACATCCAGGGAATCACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 21136 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||||||| |||| || | |||| || |||| |||| ||| | ||| | ||| Sbjct 21135 GGAGTCAAGCGTATCTCCGGGCTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGTTC 21076 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 21075 CTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 21016 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| ||||||| ||||||| || | |||||||||||||| | | || ||||| || Sbjct 21015 ACCGCCATGGACGTCGTCTACGCGCTCAAACGTCAAGGCCGCACCCTGTACGGTTTCGGC 20956 Query 16694 AGTTAA 16699 ||||| Sbjct 20955 GGTTAA 20950 >seq2703 Length=47987 Score = 168 bits (186), Expect = 1e-37 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||||||||| || |||||||||||||| ||||| ||| Sbjct 9135 CTCCGTGACAACATCCAGGGAATCACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 9076 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 |||||||||||| | || ||| | |||| || |||| |||| ||| | ||| | ||| Sbjct 9075 GGAGTCAAGCGTATTTCCGGACTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGTTC 9016 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 9015 CTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 8956 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 ||| ||||||| ||||||| || Sbjct 8955 ACCGCCATGGACGTCGTCTACGC 8933 Score = 132 bits (146), Expect = 8e-27 Identities = 170/227 (75%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| ||||| |||||||| || |||||||||||||| ||||| ||| Sbjct 20490 CTCCGTGACAACATCCAGGGAATTACCAAGCCCGCCATCCGTCGTCTGGCGCGTCGAGGT 20549 Query 16514 GGAGTCAAGCGTGTCT-CTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||||||||| | | | ||| | |||| || |||| |||| ||| | ||| | | Sbjct 20550 GGAGTCAAGCGTATTTGCCGGACTCATCTACGAGGAGACCCGTGGCGTTCTCAAGGTGGT 20609 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA-GCACGCTAA-ACGTAAGACT 16630 |||| ||| ||| |||| || || || ||| |||| |||||| || | | || | Sbjct 20610 CCTCGAGAACGTGATCCGCGACGCCGTCACCTA-CCCGAGGCACGCCAAGAGGCAAACCG 20668 Query 16631 GTCACC--TCCATGGATA-TCGTCTATGCATTGAAACGTCAAGGCCG 16674 |||||| |||||| | ||||||| || | |||||||||||||| Sbjct 20669 GTCACCAGCGCATGGACAGTCGTCTACGCGCTAAAACGTCAAGGCCG 20715 >seq91229 Length=326 Score = 96.9 bits (106), Expect = 5e-16 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| |||| ||| | ||| | |||||| ||| ||| |||| || || || ||| Sbjct 325 GAGACCCGTGGCGTTCTCAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACCTAC 266 Query 16607 ACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGT 16666 ||||||||||| || | ||||| |||||| ||||||| ||||||| || | |||||| Sbjct 265 ACCGAGCACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAACGT 206 Query 16667 CAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||||| | | || ||||| || ||||| Sbjct 205 CAAGGCCGCACCCTGTACGGTTTCGGCGGTTAA 173 >seq122926 Length=264 Score = 82.4 bits (90), Expect = 1e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641 ||| |||| || || || ||| ||||||||||| || | ||||| |||||| |||| Sbjct 264 CGTGATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGGAAGACCGTCACCGCCAT 205 Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| ||||||| || | |||||||||||||| | | || |||||||| ||||| Sbjct 204 GGACGTCGTCTACGCGCTAAAACGTCAAGGCCGCACCCTGTACGGTTTTGGCGGTTAA 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78927093237684