Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3053 100 2e-16 seq619 82.4 6e-11 >seq3053 Length=52643 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || |||||||| ||||| ||||||||||| ||| | ||| || || Sbjct 11918 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 11977 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| | | || ||| || || || || ||||| |||| ||| || Sbjct 11978 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 12037 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || |||| || || || ||||| ||||||| ||| || | ||||| || Sbjct 12038 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 12097 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || ||||| ||||| Sbjct 12098 CATCCAGAAAGAATCTAC 12115 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || |||||||| ||||| ||||||||||| ||| | ||| || || Sbjct 35578 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 35637 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| | | || ||| || || || || ||||| |||| ||| || Sbjct 35638 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 35697 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || |||| || || || ||||| ||||||| ||| || | ||||| || Sbjct 35698 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 35757 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || ||||| ||||| Sbjct 35758 CATCCAGAAAGAATCTAC 35775 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || |||||||| ||||| ||||||||||| ||| | ||| || || Sbjct 47213 AATGCAAATCTTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 47272 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| | | || || || || || || ||||| |||| ||| || Sbjct 47273 TGACACTATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 47332 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || |||| || || || ||||| ||||||| ||| || | ||||| || Sbjct 47333 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 47392 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || ||||| ||||| Sbjct 47393 CATCCAGAAAGAATCTAC 47410 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || | || ||||||||||| ||| | ||| || |||| Sbjct 11463 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 11522 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || || || || ||||| |||| ||| ||| Sbjct 11523 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 11582 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || |||| || || || ||||| ||||||| ||| || | ||||| ||| Sbjct 11583 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 11642 Query 115466 ATTCAAAAAGAGTCTAC 115482 || || ||||| ||||| Sbjct 11643 ATCCAGAAAGAATCTAC 11659 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || | || ||||||||||| ||| | ||| || |||| Sbjct 35123 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 35182 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || || || || ||||| |||| ||| ||| Sbjct 35183 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 35242 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || |||| || || || ||||| ||||||| ||| || | ||||| ||| Sbjct 35243 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 35302 Query 115466 ATTCAAAAAGAGTCTAC 115482 || || ||||| ||||| Sbjct 35303 ATCCAGAAAGAATCTAC 35319 >seq619 Length=161512 Score = 82.4 bits (90), Expect = 6e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 115295 TTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC-GACACTGT 115353 || |||||||| ||||| ||||||||||| ||| | ||| || ||| | |||||| | Sbjct 111421 TTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGA-ACCATCTGACACTAT 111479 Query 115354 TGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACT 115413 || | | |||||| || || || || ||||| |||| ||| |||||| | || Sbjct 111480 TGAAAACGTAAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAGCAACGTCT 111539 Query 115414 TATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAA 115473 |||| || || || || || ||||| | ||| || | ||||| ||||| || || Sbjct 111540 CATTTTCGCTGGAAAGCAGTTGGAAGACGGACGTACCCTGTCTGATTACAACATCCAGAA 111599 Query 115474 AGAGTCTAC 115482 ||| ||||| Sbjct 111600 AGAATCTAC 111608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424504273646560