Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1195 122 7e-23 seq288 116 3e-21 seq1701 105 5e-18 seq3053 89.7 4e-13 seq612 89.7 4e-13 seq78 84.2 2e-11 >seq1195 Length=97530 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 71657 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71716 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| ||||| || ||| | || || |||||||| || ||| Sbjct 71717 AGGGTTCTACCATCTTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGG 71776 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 71777 ATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACC 71836 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 71837 TCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||| || ||||||||||| || ||||||||||| | Sbjct 71885 CCTCCACGAAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71944 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || ||| | || || |||||||| || ||| Sbjct 71945 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGG 72004 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 72005 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACA 72064 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| |||| |||||||| ||||||||||| Sbjct 72065 TCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 111 bits (122), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 16706 TACCCTCCTC-GTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764 |||| || || | || |||| ||||| || || ||||||||||| || ||||||||||| Sbjct 71425 TACCATCTTCCGAAGTCTCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 71484 Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | | |||| | | |||||||| ||||| || ||| | || || |||||||| || Sbjct 71485 AGAGAGGGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGG 71544 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 || | ||||| ||||| ||| | ||| || | | | ||||| ||||| Sbjct 71545 TGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTC 71604 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||| |||||||| || || ||||| || ||||| ||||||||||| Sbjct 71605 CACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 72113 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 72172 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || || | || || || ||||| || ||| Sbjct 72173 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 72232 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 72233 ATGCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACC 72292 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || || ||||| || ||||| ||||| ||||| Sbjct 72293 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || ||||||||||| || ||||||||||| | Sbjct 68601 CCTCCACGAAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 68660 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || || | || || || ||||| || ||| Sbjct 68661 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 68720 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 68721 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACC 68780 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 68781 TCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 >seq288 Length=257319 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 247377 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247318 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || || | || || || ||||| || ||| Sbjct 247317 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 247258 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | |||||| |||||| Sbjct 247257 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACC 247198 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| |||| |||||||| ||||||||||| Sbjct 247197 TCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 247149 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247090 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || ||| | || || || ||||| || ||| Sbjct 247089 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGG 247030 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 247029 ATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACC 246970 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 |||| |||||||| || || |||| ||||||||||| |||||||| || Sbjct 246969 TCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCATCTT 246920 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 247605 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247546 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || |||| |||||| || || | || || || ||||| || ||| Sbjct 247545 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 247486 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | ||||| |||||| Sbjct 247485 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACA 247426 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| |||| |||||||| ||||||||||| Sbjct 247425 TCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 16745 TCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAA 16804 ||||| || ||||||||||| | | |||| | | || |||| |||||| || ||| | Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 16805 ATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGG 16864 || || |||||||| || ||| | ||||| ||||| ||| | ||| || | Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTT 257200 Query 16865 CCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924 | | ||||| |||||| |||| |||||||| || || |||| |||||||| Sbjct 257199 TCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 257140 Query 16925 AAAATCTGCAT 16935 ||||||||||| Sbjct 257139 AAAATCTGCAT 257129 >seq1701 Length=66225 Score = 105 bits (116), Expect = 5e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| |||| || || |||| || || ||||| |||||||| ||||||||||||| Sbjct 18138 CCTCCACGTAATCTGAGGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 18197 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 | |||| || | || |||||||||||||| ||| | ||||| ||||||||||| Sbjct 18198 AAGGTTCTGTCATCTTCCAATTGTTTGCCGGCAAAGATAAGTCGCTGTTGGTC 18250 >seq3053 Length=52643 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||| |||| || || || || || || || |||||||| || | | Sbjct 47212 CCTCCTCTCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAC 47153 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| ||||| || || || ||| |||| || || || ||||| ||| Sbjct 47152 AGGGTACGTCCGTCTTCCAACTGCTTTCCAGCAAAAATGAGACGTTGCTGGTCAGGAGGG 47093 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || |||||| | | | ||| || | ||| || Sbjct 47092 ATACCTTCCTTGTCTTGGATCTTGGC--CTTCACGTTTTCAATAGTATCACTGGGTTCAA 47035 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | |||||||||||| ||||||| || || ||||| || |||||| Sbjct 47034 CTTCTAGGGTGATGGTTTTACCGGTCAAAGTCTTCACAAAGATTTGCATT 46985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 || || || || || | ||| |||| || || || || || || || |||||||| || Sbjct 12148 TAGCCCCCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCA 12089 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 | || ||| | || |||||||| || || || |||| || || || ||||| | Sbjct 12088 GACAAGGTACGTCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGA 12029 Query 16826 GGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCT 16883 || | || || ||||| || || ||| ||||| | | | |||||| ||| | Sbjct 12028 GGGATACCTTCCTTGTCTTGGATCTTAGCT--TTCACGTTTTCAATAGTGTCAGAGGGTT 11971 Query 16884 CCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||| | ||||||||||||||| || || |||||||| || || |||||| Sbjct 11970 CAACTTCTAGGGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATTTGCATT 11918 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 || || || || || | ||| |||| || || || || || || || |||||||| || Sbjct 35808 TAGCCCCCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCA 35749 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 | || ||| | || |||||||| || || || |||| || || || ||||| | Sbjct 35748 GACAAGGTACGTCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGA 35689 Query 16826 GGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCT 16883 || | || || ||||| || || ||| ||||| | | | |||||| ||| | Sbjct 35688 GGGATACCTTCCTTGTCTTGGATCTTAGCT--TTCACGTTTTCAATAGTGTCAGAGGGTT 35631 Query 16884 CCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||| | ||||||||||||||| || || |||||||| || || |||||| Sbjct 35630 CAACTTCTAGGGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATTTGCATT 35578 >seq612 Length=165075 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || |||| |||| ||| || ||||||||||| || ||||||||||| | Sbjct 62107 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 62048 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || ||||| ||||| || ||| | || || || ||||| || ||| Sbjct 62047 AGGGTTCTTCCATCTTCCAACTGTTTACCAGCAAAGATCAGACGTTGTTGATCAGGAGGG 61988 Query 16829 ACGCCCTCTTTGTC 16842 | |||||| ||||| Sbjct 61987 ATGCCCTCCTTGTC 61974 >seq78 Length=379166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||| |||| || || || || || || || |||||||| || | | Sbjct 70374 CCTCCTCTCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAC 70433 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| ||||| || || || || |||| || || || ||||| ||| Sbjct 70434 AAGGTACGTCCGTCTTCCAACTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGAGGG 70493 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || || |||||| | | | |||||| ||| || Sbjct 70494 ATACCTTCCTTATCTTGGATCTTAGC--CTTCACATTTTCAATAGTGTCAGAGGGTTCAA 70551 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| || |||| ||||| ||||| |||||||| Sbjct 70552 CCTCCAAGGTGATGGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 70600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404288263624120