Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq24658 140 4e-28 seq2136 140 4e-28 seq7449 129 7e-25 seq995 129 7e-25 seq144056 116 4e-21 seq226 105 7e-18 seq204 93.3 5e-14 >seq24658 Length=782 Score = 140 bits (154), Expect = 4e-28 Identities = 85/89 (96%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct 457 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGA 516 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||||| Sbjct 517 GCGTGGGTTCGAACCCCACACCTGACAAA 545 >seq2136 Length=46755 Score = 140 bits (154), Expect = 4e-28 Identities = 94/104 (90%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 6289 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 6230 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||||||||||||||||||||||||||| ||| | | ||||||| Sbjct 6229 GTGGGTTCGAACCCCACACCTGACAAAACATTTTAGTAATTTTT 6186 >seq7449 Length=18981 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 8667 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 8608 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 8607 GTGGGTTCGAACCCCACACCTGACA 8583 >seq995 Length=204885 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 68524 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 68465 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 68464 GTGGGTTCGAACCCCACACCTGACA 68440 >seq144056 Length=231 Score = 116 bits (128), Expect = 4e-21 Identities = 73/78 (94%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| Sbjct 154 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGC 213 Query 126323 GTGGGTTCGAACCCCACA 126340 |||||||||||||||||| Sbjct 214 GTGGGTTCGAACCCCACA 231 >seq226 Length=268557 Score = 105 bits (116), Expect = 7e-18 Identities = 66/70 (94%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 126282 GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCAC 126339 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct 198720 GGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGCGTGGGTTCGAACCCCAC 198661 Query 126340 ACCTGACAAA 126349 |||||||||| Sbjct 198660 ACCTGACAAA 198651 >seq204 Length=278841 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||| ||||| || ||||||| || ||||| |||||||| || ||||| | | Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCT 93691 || || || ||||||||||| || || |||||||| ||| || |||||| Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATTATCT 77749 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || ||||| | | | |||||||||||| || |||||||||||||| || ||| Sbjct 82561 ATGTAGGTGTCGATGAGTAAACTATACATTTCAGAGTGAACATTCTCCATTGCTATCTGG 82502 Query 93422 AATCCGTAGAAACATCTAGC 93441 || |||||||||||||| || Sbjct 82501 AACCCGTAGAAACATCTGGC 82482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555733240409120