Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1517 102 6e-17 seq125383 86.0 5e-12 >seq1517 Length=79253 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 114388 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 2597 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 2656 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || |||||| |||| ||| || Sbjct 2657 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 2690 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 115585 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 2597 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 2656 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || |||||| |||| ||| || Sbjct 2657 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 2690 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 114388 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 11708 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 11767 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || |||||| |||| ||| || Sbjct 11768 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 11801 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 115585 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 11708 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 11767 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || |||||| |||| ||| || Sbjct 11768 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 11801 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 114388 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 53290 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 53349 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || |||||| |||| ||| || Sbjct 53350 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 53383 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 115585 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 53290 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 53349 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || |||||| |||| ||| || Sbjct 53350 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 53383 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 114388 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 73677 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 73736 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || |||||| |||| ||| || Sbjct 73737 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 73770 Score = 102 bits (112), Expect = 6e-17 Identities = 81/94 (86%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 115585 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 73677 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 73736 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || |||||| |||| ||| || Sbjct 73737 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTC 73770 >seq125383 Length=259 Score = 86.0 bits (94), Expect = 5e-12 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 115585 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 257 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 198 Query 115586 ACCAAAACTGATATA 115600 |||| ||||||| || Sbjct 197 ACCATAACTGATTTA 183 Score = 86.0 bits (94), Expect = 5e-12 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA---GTAAGATCTAAGGA 114388 |||||||| |||||||||||||||| ||||||||||||||||| ||| |||| ||||| Sbjct 257 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGCGGTACGATCCAAGGA 198 Query 114389 ACCAAAACTGATATA 114403 |||| ||||||| || Sbjct 197 ACCATAACTGATTTA 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278507994376